Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 MIR6787-201ENST00000616675 61 ntBASIC20.36■□□□□ 0.85
ZC3H4Q9UPT8 AC007431.3-201ENST00000623221 587 ntBASIC20.36■□□□□ 0.85
ZC3H4Q9UPT8 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.36■□□□□ 0.85
ZC3H4Q9UPT8 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZC3H4Q9UPT8 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
ZC3H4Q9UPT8 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZC3H4Q9UPT8 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZC3H4Q9UPT8 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC20.36■□□□□ 0.85
ZC3H4Q9UPT8 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZC3H4Q9UPT8 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZC3H4Q9UPT8 SLC7A15P-201ENST00000424028 1363 ntBASIC20.35■□□□□ 0.85
ZC3H4Q9UPT8 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
ZC3H4Q9UPT8 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ZC3H4Q9UPT8 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ZC3H4Q9UPT8 BOLA2P3-201ENST00000404566 256 ntBASIC20.35■□□□□ 0.85
ZC3H4Q9UPT8 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC20.35■□□□□ 0.85
ZC3H4Q9UPT8 GNAQP1-201ENST00000444815 1067 ntBASIC20.35■□□□□ 0.85
ZC3H4Q9UPT8 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
ZC3H4Q9UPT8 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC20.35■□□□□ 0.85
ZC3H4Q9UPT8 AC092552.1-201ENST00000547243 906 ntBASIC20.35■□□□□ 0.85
ZC3H4Q9UPT8 ORC6-206ENST00000568364 888 ntTSL 5 BASIC20.35■□□□□ 0.85
ZC3H4Q9UPT8 CHCHD2P3-201ENST00000603038 451 ntBASIC20.35■□□□□ 0.85
ZC3H4Q9UPT8 WT1-AS_2.1-201ENST00000613208 137 ntBASIC20.35■□□□□ 0.85
ZC3H4Q9UPT8 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
ZC3H4Q9UPT8 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ZC3H4Q9UPT8 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ZC3H4Q9UPT8 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ZC3H4Q9UPT8 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.35■□□□□ 0.85
ZC3H4Q9UPT8 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ZC3H4Q9UPT8 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ZC3H4Q9UPT8 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
ZC3H4Q9UPT8 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ZC3H4Q9UPT8 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ZC3H4Q9UPT8 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ZC3H4Q9UPT8 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ZC3H4Q9UPT8 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ZC3H4Q9UPT8 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ZC3H4Q9UPT8 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZC3H4Q9UPT8 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZC3H4Q9UPT8 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ZC3H4Q9UPT8 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZC3H4Q9UPT8 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
ZC3H4Q9UPT8 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC20.34■□□□□ 0.85
ZC3H4Q9UPT8 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC20.34■□□□□ 0.85
ZC3H4Q9UPT8 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC20.34■□□□□ 0.85
ZC3H4Q9UPT8 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC20.34■□□□□ 0.85
ZC3H4Q9UPT8 DOC2GP-202ENST00000514950 1163 ntBASIC20.34■□□□□ 0.85
ZC3H4Q9UPT8 AC055876.2-201ENST00000531834 546 ntBASIC20.34■□□□□ 0.85
ZC3H4Q9UPT8 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC20.34■□□□□ 0.85
ZC3H4Q9UPT8 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC20.34■□□□□ 0.85
ZC3H4Q9UPT8 AL139327.4-201ENST00000612362 153 ntBASIC20.34■□□□□ 0.85
ZC3H4Q9UPT8 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC20.34■□□□□ 0.85
ZC3H4Q9UPT8 AL031598.1-201ENST00000561511 1773 ntBASIC20.34■□□□□ 0.85
ZC3H4Q9UPT8 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
ZC3H4Q9UPT8 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZC3H4Q9UPT8 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC20.34■□□□□ 0.85
ZC3H4Q9UPT8 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC20.34■□□□□ 0.85
ZC3H4Q9UPT8 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC20.34■□□□□ 0.85
ZC3H4Q9UPT8 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
ZC3H4Q9UPT8 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZC3H4Q9UPT8 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZC3H4Q9UPT8 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC20.34■□□□□ 0.85
ZC3H4Q9UPT8 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZC3H4Q9UPT8 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ZC3H4Q9UPT8 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZC3H4Q9UPT8 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
ZC3H4Q9UPT8 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ZC3H4Q9UPT8 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
ZC3H4Q9UPT8 AL080243.2-201ENST00000418783 582 ntBASIC20.33■□□□□ 0.85
ZC3H4Q9UPT8 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC20.33■□□□□ 0.85
ZC3H4Q9UPT8 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ZC3H4Q9UPT8 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC20.33■□□□□ 0.85
ZC3H4Q9UPT8 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC20.33■□□□□ 0.85
ZC3H4Q9UPT8 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC20.33■□□□□ 0.85
ZC3H4Q9UPT8 NOC2LP2-201ENST00000407594 1944 ntBASIC20.33■□□□□ 0.85
ZC3H4Q9UPT8 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
ZC3H4Q9UPT8 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ZC3H4Q9UPT8 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC20.33■□□□□ 0.85
ZC3H4Q9UPT8 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ZC3H4Q9UPT8 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ZC3H4Q9UPT8 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ZC3H4Q9UPT8 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
ZC3H4Q9UPT8 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ZC3H4Q9UPT8 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.33■□□□□ 0.84
ZC3H4Q9UPT8 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ZC3H4Q9UPT8 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC20.33■□□□□ 0.84
ZC3H4Q9UPT8 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
ZC3H4Q9UPT8 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
ZC3H4Q9UPT8 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
ZC3H4Q9UPT8 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ZC3H4Q9UPT8 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZC3H4Q9UPT8 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
ZC3H4Q9UPT8 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZC3H4Q9UPT8 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZC3H4Q9UPT8 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
ZC3H4Q9UPT8 OSM-203ENST00000403463 464 ntTSL 3 BASIC20.32■□□□□ 0.84
ZC3H4Q9UPT8 HIST1H2BPS3-201ENST00000419683 341 ntBASIC20.32■□□□□ 0.84
ZC3H4Q9UPT8 RASL12-203ENST00000434605 982 ntTSL 2 BASIC20.32■□□□□ 0.84
ZC3H4Q9UPT8 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
ZC3H4Q9UPT8 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms