Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP4E1Q9UPM8 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.61■□□□□ 0.41
AP4E1Q9UPM8 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
AP4E1Q9UPM8 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP4E1Q9UPM8 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.61■□□□□ 0.41
AP4E1Q9UPM8 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP4E1Q9UPM8 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.61■□□□□ 0.41
AP4E1Q9UPM8 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
AP4E1Q9UPM8 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP4E1Q9UPM8 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
AP4E1Q9UPM8 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.61■□□□□ 0.41
AP4E1Q9UPM8 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP4E1Q9UPM8 AL645728.1-201ENST00000366221 2101 ntBASIC17.61■□□□□ 0.41
AP4E1Q9UPM8 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP4E1Q9UPM8 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP4E1Q9UPM8 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.61■□□□□ 0.41
AP4E1Q9UPM8 AC009078.2-202ENST00000463353 338 ntBASIC17.61■□□□□ 0.41
AP4E1Q9UPM8 AC092910.1-201ENST00000482027 1129 ntBASIC17.61■□□□□ 0.41
AP4E1Q9UPM8 SLC25A6P2-201ENST00000497974 877 ntBASIC17.61■□□□□ 0.41
AP4E1Q9UPM8 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.61■□□□□ 0.41
AP4E1Q9UPM8 SLC25A6P4-201ENST00000586535 553 ntBASIC17.61■□□□□ 0.41
AP4E1Q9UPM8 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.61■□□□□ 0.41
AP4E1Q9UPM8 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.61■□□□□ 0.41
AP4E1Q9UPM8 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.61■□□□□ 0.41
AP4E1Q9UPM8 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.61■□□□□ 0.41
AP4E1Q9UPM8 GGTLC5P-201ENST00000617623 998 ntBASIC17.61■□□□□ 0.41
AP4E1Q9UPM8 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.61■□□□□ 0.41
AP4E1Q9UPM8 AC117500.6-201ENST00000624871 588 ntBASIC17.61■□□□□ 0.41
AP4E1Q9UPM8 PGM5P2-202ENST00000637225 1043 ntBASIC17.61■□□□□ 0.41
AP4E1Q9UPM8 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.61■□□□□ 0.41
AP4E1Q9UPM8 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.61■□□□□ 0.41
AP4E1Q9UPM8 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.61■□□□□ 0.41
AP4E1Q9UPM8 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
AP4E1Q9UPM8 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
AP4E1Q9UPM8 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP4E1Q9UPM8 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
AP4E1Q9UPM8 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.61■□□□□ 0.41
AP4E1Q9UPM8 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
AP4E1Q9UPM8 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP4E1Q9UPM8 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.61■□□□□ 0.41
AP4E1Q9UPM8 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
AP4E1Q9UPM8 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP4E1Q9UPM8 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
AP4E1Q9UPM8 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP4E1Q9UPM8 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP4E1Q9UPM8 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
AP4E1Q9UPM8 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP4E1Q9UPM8 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP4E1Q9UPM8 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.6■□□□□ 0.41
AP4E1Q9UPM8 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
AP4E1Q9UPM8 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP4E1Q9UPM8 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP4E1Q9UPM8 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP4E1Q9UPM8 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.6■□□□□ 0.41
AP4E1Q9UPM8 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.6■□□□□ 0.41
AP4E1Q9UPM8 IGHV3-65-201ENST00000523210 341 ntBASIC17.6■□□□□ 0.41
AP4E1Q9UPM8 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.6■□□□□ 0.41
AP4E1Q9UPM8 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.6■□□□□ 0.41
AP4E1Q9UPM8 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
AP4E1Q9UPM8 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
AP4E1Q9UPM8 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
AP4E1Q9UPM8 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
AP4E1Q9UPM8 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP4E1Q9UPM8 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
AP4E1Q9UPM8 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
AP4E1Q9UPM8 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.6■□□□□ 0.41
AP4E1Q9UPM8 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
AP4E1Q9UPM8 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
AP4E1Q9UPM8 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
AP4E1Q9UPM8 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
AP4E1Q9UPM8 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
AP4E1Q9UPM8 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.6■□□□□ 0.41
AP4E1Q9UPM8 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
AP4E1Q9UPM8 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.6■□□□□ 0.41
AP4E1Q9UPM8 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP4E1Q9UPM8 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP4E1Q9UPM8 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
AP4E1Q9UPM8 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.59■□□□□ 0.41
AP4E1Q9UPM8 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.59■□□□□ 0.41
AP4E1Q9UPM8 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP4E1Q9UPM8 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP4E1Q9UPM8 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
AP4E1Q9UPM8 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP4E1Q9UPM8 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP4E1Q9UPM8 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
AP4E1Q9UPM8 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
AP4E1Q9UPM8 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
AP4E1Q9UPM8 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.59■□□□□ 0.41
AP4E1Q9UPM8 TOP3BP1-201ENST00000420768 1380 ntBASIC17.59■□□□□ 0.41
AP4E1Q9UPM8 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
AP4E1Q9UPM8 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.59■□□□□ 0.41
AP4E1Q9UPM8 RNA5SP419-201ENST00000515908 135 ntBASIC17.59■□□□□ 0.41
AP4E1Q9UPM8 AL662844.1-201ENST00000546340 181 ntBASIC17.59■□□□□ 0.41
AP4E1Q9UPM8 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.59■□□□□ 0.41
AP4E1Q9UPM8 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.59■□□□□ 0.41
AP4E1Q9UPM8 AP001005.1-201ENST00000571755 1248 ntBASIC17.59■□□□□ 0.41
AP4E1Q9UPM8 AL121894.2-201ENST00000602977 491 ntBASIC17.59■□□□□ 0.41
AP4E1Q9UPM8 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
AP4E1Q9UPM8 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
AP4E1Q9UPM8 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms