Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SPHK1Q9NYA1 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.32■□□□□ 0.2
SPHK1Q9NYA1 PDPK2P-202ENST00000562415 1191 ntBASIC16.32■□□□□ 0.2
SPHK1Q9NYA1 AC007064.4-201ENST00000637740 555 ntBASIC16.32■□□□□ 0.2
SPHK1Q9NYA1 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SPHK1Q9NYA1 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
SPHK1Q9NYA1 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SPHK1Q9NYA1 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SPHK1Q9NYA1 PCDHB17P-201ENST00000539533 2393 ntBASIC16.31■□□□□ 0.2
SPHK1Q9NYA1 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.31■□□□□ 0.2
SPHK1Q9NYA1 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SPHK1Q9NYA1 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SPHK1Q9NYA1 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPHK1Q9NYA1 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPHK1Q9NYA1 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.31■□□□□ 0.2
SPHK1Q9NYA1 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPHK1Q9NYA1 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.31■□□□□ 0.2
SPHK1Q9NYA1 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPHK1Q9NYA1 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPHK1Q9NYA1 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPHK1Q9NYA1 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
SPHK1Q9NYA1 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.31■□□□□ 0.2
SPHK1Q9NYA1 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SPHK1Q9NYA1 AC005412.3-201ENST00000580309 715 ntBASIC16.31■□□□□ 0.2
SPHK1Q9NYA1 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPHK1Q9NYA1 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.31■□□□□ 0.2
SPHK1Q9NYA1 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPHK1Q9NYA1 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPHK1Q9NYA1 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPHK1Q9NYA1 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.31■□□□□ 0.2
SPHK1Q9NYA1 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPHK1Q9NYA1 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SPHK1Q9NYA1 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPHK1Q9NYA1 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPHK1Q9NYA1 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPHK1Q9NYA1 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPHK1Q9NYA1 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPHK1Q9NYA1 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.31■□□□□ 0.2
SPHK1Q9NYA1 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPHK1Q9NYA1 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SPHK1Q9NYA1 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.31■□□□□ 0.2
SPHK1Q9NYA1 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
SPHK1Q9NYA1 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPHK1Q9NYA1 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SPHK1Q9NYA1 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SPHK1Q9NYA1 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SPHK1Q9NYA1 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.3■□□□□ 0.2
SPHK1Q9NYA1 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SPHK1Q9NYA1 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPHK1Q9NYA1 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPHK1Q9NYA1 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPHK1Q9NYA1 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SPHK1Q9NYA1 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
SPHK1Q9NYA1 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
SPHK1Q9NYA1 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.3■□□□□ 0.2
SPHK1Q9NYA1 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SPHK1Q9NYA1 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPHK1Q9NYA1 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPHK1Q9NYA1 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SPHK1Q9NYA1 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPHK1Q9NYA1 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPHK1Q9NYA1 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPHK1Q9NYA1 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SPHK1Q9NYA1 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPHK1Q9NYA1 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.3■□□□□ 0.2
SPHK1Q9NYA1 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SPHK1Q9NYA1 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.3■□□□□ 0.2
SPHK1Q9NYA1 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.3■□□□□ 0.2
SPHK1Q9NYA1 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.3■□□□□ 0.2
SPHK1Q9NYA1 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.3■□□□□ 0.2
SPHK1Q9NYA1 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.3■□□□□ 0.2
SPHK1Q9NYA1 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.3■□□□□ 0.2
SPHK1Q9NYA1 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.3■□□□□ 0.2
SPHK1Q9NYA1 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.3■□□□□ 0.2
SPHK1Q9NYA1 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SPHK1Q9NYA1 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.3■□□□□ 0.2
SPHK1Q9NYA1 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.3■□□□□ 0.2
SPHK1Q9NYA1 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SPHK1Q9NYA1 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SPHK1Q9NYA1 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPHK1Q9NYA1 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPHK1Q9NYA1 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
SPHK1Q9NYA1 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.3■□□□□ 0.2
SPHK1Q9NYA1 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPHK1Q9NYA1 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.3■□□□□ 0.2
SPHK1Q9NYA1 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPHK1Q9NYA1 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPHK1Q9NYA1 AL121761.2-201ENST00000598007 1648 ntBASIC16.3■□□□□ 0.2
SPHK1Q9NYA1 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SPHK1Q9NYA1 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SPHK1Q9NYA1 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPHK1Q9NYA1 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.29■□□□□ 0.2
SPHK1Q9NYA1 AL353732.1-201ENST00000569618 1459 ntBASIC16.29■□□□□ 0.2
SPHK1Q9NYA1 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPHK1Q9NYA1 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SPHK1Q9NYA1 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPHK1Q9NYA1 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPHK1Q9NYA1 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SPHK1Q9NYA1 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SPHK1Q9NYA1 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms