Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
SLC52A1Q9NWF4 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
SLC52A1Q9NWF4 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
SLC52A1Q9NWF4 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
SLC52A1Q9NWF4 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC23.98■■□□□ 1.43
SLC52A1Q9NWF4 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SLC52A1Q9NWF4 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
SLC52A1Q9NWF4 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
SLC52A1Q9NWF4 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SLC52A1Q9NWF4 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
SLC52A1Q9NWF4 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
SLC52A1Q9NWF4 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC23.97■■□□□ 1.43
SLC52A1Q9NWF4 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC23.97■■□□□ 1.43
SLC52A1Q9NWF4 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
SLC52A1Q9NWF4 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC23.97■■□□□ 1.43
SLC52A1Q9NWF4 DGCR5-201ENST00000399539 862 ntBASIC23.97■■□□□ 1.43
SLC52A1Q9NWF4 AC087499.6-201ENST00000411576 835 ntBASIC23.97■■□□□ 1.43
SLC52A1Q9NWF4 GIMAP3P-201ENST00000495150 836 ntBASIC23.97■■□□□ 1.43
SLC52A1Q9NWF4 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SLC52A1Q9NWF4 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC23.97■■□□□ 1.43
SLC52A1Q9NWF4 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
SLC52A1Q9NWF4 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
SLC52A1Q9NWF4 AC124947.2-201ENST00000547118 1133 ntBASIC23.97■■□□□ 1.43
SLC52A1Q9NWF4 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC23.97■■□□□ 1.43
SLC52A1Q9NWF4 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC23.97■■□□□ 1.43
SLC52A1Q9NWF4 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC23.97■■□□□ 1.43
SLC52A1Q9NWF4 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SLC52A1Q9NWF4 IGHV3-72-202ENST00000621503 303 ntBASIC23.97■■□□□ 1.43
SLC52A1Q9NWF4 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
SLC52A1Q9NWF4 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC23.97■■□□□ 1.43
SLC52A1Q9NWF4 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
SLC52A1Q9NWF4 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SLC52A1Q9NWF4 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
SLC52A1Q9NWF4 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC23.96■■□□□ 1.43
SLC52A1Q9NWF4 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC23.96■■□□□ 1.43
SLC52A1Q9NWF4 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
SLC52A1Q9NWF4 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC23.96■■□□□ 1.43
SLC52A1Q9NWF4 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC23.96■■□□□ 1.43
SLC52A1Q9NWF4 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SLC52A1Q9NWF4 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC23.96■■□□□ 1.43
SLC52A1Q9NWF4 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC23.96■■□□□ 1.43
SLC52A1Q9NWF4 IGHV3-71-201ENST00000523324 359 ntBASIC23.96■■□□□ 1.43
SLC52A1Q9NWF4 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC23.96■■□□□ 1.43
SLC52A1Q9NWF4 AC104794.3-201ENST00000566840 1248 ntBASIC23.96■■□□□ 1.43
SLC52A1Q9NWF4 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC23.96■■□□□ 1.43
SLC52A1Q9NWF4 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SLC52A1Q9NWF4 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SLC52A1Q9NWF4 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
SLC52A1Q9NWF4 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SLC52A1Q9NWF4 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SLC52A1Q9NWF4 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SLC52A1Q9NWF4 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.43
SLC52A1Q9NWF4 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
SLC52A1Q9NWF4 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC23.95■■□□□ 1.43
SLC52A1Q9NWF4 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
SLC52A1Q9NWF4 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC23.95■■□□□ 1.42
SLC52A1Q9NWF4 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
SLC52A1Q9NWF4 GNAQP1-201ENST00000444815 1067 ntBASIC23.95■■□□□ 1.42
SLC52A1Q9NWF4 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
SLC52A1Q9NWF4 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC23.95■■□□□ 1.42
SLC52A1Q9NWF4 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
SLC52A1Q9NWF4 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC23.95■■□□□ 1.42
SLC52A1Q9NWF4 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
SLC52A1Q9NWF4 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC23.95■■□□□ 1.42
SLC52A1Q9NWF4 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
SLC52A1Q9NWF4 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
SLC52A1Q9NWF4 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC23.95■■□□□ 1.42
SLC52A1Q9NWF4 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC23.95■■□□□ 1.42
SLC52A1Q9NWF4 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
SLC52A1Q9NWF4 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
SLC52A1Q9NWF4 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
SLC52A1Q9NWF4 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC23.95■■□□□ 1.42
SLC52A1Q9NWF4 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC23.95■■□□□ 1.42
SLC52A1Q9NWF4 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
SLC52A1Q9NWF4 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
SLC52A1Q9NWF4 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
SLC52A1Q9NWF4 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
SLC52A1Q9NWF4 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
SLC52A1Q9NWF4 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC23.94■■□□□ 1.42
SLC52A1Q9NWF4 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SLC52A1Q9NWF4 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
SLC52A1Q9NWF4 PXK-206ENST00000463280 2825 ntTSL 2 BASIC23.94■■□□□ 1.42
SLC52A1Q9NWF4 COMP-202ENST00000425807 2292 ntTSL 2 BASIC23.94■■□□□ 1.42
SLC52A1Q9NWF4 TUBB8P12-201ENST00000308911 1335 ntBASIC23.94■■□□□ 1.42
SLC52A1Q9NWF4 TUBB7P-202ENST00000428444 1305 ntBASIC23.94■■□□□ 1.42
SLC52A1Q9NWF4 TUBB8P7-204ENST00000567960 1332 ntBASIC23.94■■□□□ 1.42
SLC52A1Q9NWF4 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
SLC52A1Q9NWF4 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC23.94■■□□□ 1.42
SLC52A1Q9NWF4 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SLC52A1Q9NWF4 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC23.94■■□□□ 1.42
SLC52A1Q9NWF4 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC23.94■■□□□ 1.42
SLC52A1Q9NWF4 RNA5SP410-201ENST00000516285 106 ntBASIC23.94■■□□□ 1.42
SLC52A1Q9NWF4 AC010336.2-201ENST00000564226 506 ntBASIC23.94■■□□□ 1.42
SLC52A1Q9NWF4 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
SLC52A1Q9NWF4 AL162274.1-201ENST00000617191 1098 ntBASIC23.94■■□□□ 1.42
SLC52A1Q9NWF4 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
SLC52A1Q9NWF4 AC006277.1-201ENST00000624348 1610 ntBASIC23.94■■□□□ 1.42
SLC52A1Q9NWF4 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SLC52A1Q9NWF4 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC23.94■■□□□ 1.42
SLC52A1Q9NWF4 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms