Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
UBQLN3Q9H347 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
UBQLN3Q9H347 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
UBQLN3Q9H347 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
UBQLN3Q9H347 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
UBQLN3Q9H347 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
UBQLN3Q9H347 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
UBQLN3Q9H347 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
UBQLN3Q9H347 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
UBQLN3Q9H347 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
UBQLN3Q9H347 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
UBQLN3Q9H347 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
UBQLN3Q9H347 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.76■□□□□ 0.11
UBQLN3Q9H347 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.76■□□□□ 0.11
UBQLN3Q9H347 AC136632.2-201ENST00000512891 861 ntBASIC15.76■□□□□ 0.11
UBQLN3Q9H347 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.76■□□□□ 0.11
UBQLN3Q9H347 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
UBQLN3Q9H347 PGM5P2-202ENST00000637225 1043 ntBASIC15.76■□□□□ 0.11
UBQLN3Q9H347 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
UBQLN3Q9H347 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
UBQLN3Q9H347 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
UBQLN3Q9H347 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
UBQLN3Q9H347 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
UBQLN3Q9H347 AC097637.2-201ENST00000624096 1997 ntBASIC15.76■□□□□ 0.11
UBQLN3Q9H347 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
UBQLN3Q9H347 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
UBQLN3Q9H347 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.76■□□□□ 0.11
UBQLN3Q9H347 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.76■□□□□ 0.11
UBQLN3Q9H347 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
UBQLN3Q9H347 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
UBQLN3Q9H347 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
UBQLN3Q9H347 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
UBQLN3Q9H347 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
UBQLN3Q9H347 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
UBQLN3Q9H347 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
UBQLN3Q9H347 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
UBQLN3Q9H347 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.75■□□□□ 0.11
UBQLN3Q9H347 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
UBQLN3Q9H347 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
UBQLN3Q9H347 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
UBQLN3Q9H347 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.75■□□□□ 0.11
UBQLN3Q9H347 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
UBQLN3Q9H347 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
UBQLN3Q9H347 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.75■□□□□ 0.11
UBQLN3Q9H347 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
UBQLN3Q9H347 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.75■□□□□ 0.11
UBQLN3Q9H347 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
UBQLN3Q9H347 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
UBQLN3Q9H347 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.75■□□□□ 0.11
UBQLN3Q9H347 ELK2BP-201ENST00000415014 1224 ntBASIC15.75■□□□□ 0.11
UBQLN3Q9H347 ACTG1P4-201ENST00000425123 1122 ntBASIC15.75■□□□□ 0.11
UBQLN3Q9H347 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.75■□□□□ 0.11
UBQLN3Q9H347 RNA5SP415-201ENST00000517246 115 ntBASIC15.75■□□□□ 0.11
UBQLN3Q9H347 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.75■□□□□ 0.11
UBQLN3Q9H347 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.75■□□□□ 0.11
UBQLN3Q9H347 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
UBQLN3Q9H347 AL353135.1-201ENST00000606729 504 ntBASIC15.75■□□□□ 0.11
UBQLN3Q9H347 MIR1199-201ENST00000621445 119 ntBASIC15.75■□□□□ 0.11
UBQLN3Q9H347 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
UBQLN3Q9H347 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
UBQLN3Q9H347 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.75■□□□□ 0.11
UBQLN3Q9H347 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.75■□□□□ 0.11
UBQLN3Q9H347 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
UBQLN3Q9H347 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
UBQLN3Q9H347 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
UBQLN3Q9H347 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
UBQLN3Q9H347 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.75■□□□□ 0.11
UBQLN3Q9H347 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
UBQLN3Q9H347 PCDHB19P-201ENST00000570871 2371 ntBASIC15.75■□□□□ 0.11
UBQLN3Q9H347 AC006504.4-201ENST00000592118 1568 ntBASIC15.75■□□□□ 0.11
UBQLN3Q9H347 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
UBQLN3Q9H347 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
UBQLN3Q9H347 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
UBQLN3Q9H347 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
UBQLN3Q9H347 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
UBQLN3Q9H347 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
UBQLN3Q9H347 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
UBQLN3Q9H347 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
UBQLN3Q9H347 AL135999.2-201ENST00000622438 1686 ntBASIC15.74■□□□□ 0.11
UBQLN3Q9H347 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
UBQLN3Q9H347 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
UBQLN3Q9H347 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
UBQLN3Q9H347 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
UBQLN3Q9H347 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
UBQLN3Q9H347 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
UBQLN3Q9H347 MIR574-201ENST00000385209 96 ntBASIC15.74■□□□□ 0.11
UBQLN3Q9H347 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
UBQLN3Q9H347 LINC00982-205ENST00000420957 435 ntBASIC15.74■□□□□ 0.11
UBQLN3Q9H347 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
UBQLN3Q9H347 PMS2P1-201ENST00000431037 1228 ntBASIC15.74■□□□□ 0.11
UBQLN3Q9H347 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
UBQLN3Q9H347 Z83851.2-201ENST00000609564 659 ntBASIC15.74■□□□□ 0.11
UBQLN3Q9H347 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
UBQLN3Q9H347 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
UBQLN3Q9H347 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
UBQLN3Q9H347 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
UBQLN3Q9H347 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
UBQLN3Q9H347 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
UBQLN3Q9H347 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.74■□□□□ 0.11
UBQLN3Q9H347 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms