Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 METTL23-205ENST00000588302 925 ntTSL 5 BASIC20.54■□□□□ 0.88
RPAP1Q9BWH6 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC20.54■□□□□ 0.88
RPAP1Q9BWH6 AC092902.6-201ENST00000641783 218 ntBASIC20.54■□□□□ 0.88
RPAP1Q9BWH6 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RPAP1Q9BWH6 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPAP1Q9BWH6 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPAP1Q9BWH6 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC20.54■□□□□ 0.88
RPAP1Q9BWH6 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPAP1Q9BWH6 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPAP1Q9BWH6 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPAP1Q9BWH6 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPAP1Q9BWH6 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC20.54■□□□□ 0.88
RPAP1Q9BWH6 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPAP1Q9BWH6 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPAP1Q9BWH6 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RPAP1Q9BWH6 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC20.53■□□□□ 0.88
RPAP1Q9BWH6 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
RPAP1Q9BWH6 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC20.53■□□□□ 0.88
RPAP1Q9BWH6 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RPAP1Q9BWH6 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC20.53■□□□□ 0.88
RPAP1Q9BWH6 PAWRP1-201ENST00000451083 565 ntBASIC20.53■□□□□ 0.88
RPAP1Q9BWH6 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC20.53■□□□□ 0.88
RPAP1Q9BWH6 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
RPAP1Q9BWH6 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPAP1Q9BWH6 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC20.53■□□□□ 0.88
RPAP1Q9BWH6 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPAP1Q9BWH6 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPAP1Q9BWH6 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC20.53■□□□□ 0.88
RPAP1Q9BWH6 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
RPAP1Q9BWH6 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RPAP1Q9BWH6 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC20.53■□□□□ 0.88
RPAP1Q9BWH6 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC20.53■□□□□ 0.88
RPAP1Q9BWH6 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RPAP1Q9BWH6 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RPAP1Q9BWH6 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RPAP1Q9BWH6 GOLGA6L17P-202ENST00000614358 1398 ntBASIC20.52■□□□□ 0.88
RPAP1Q9BWH6 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RPAP1Q9BWH6 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC20.52■□□□□ 0.88
RPAP1Q9BWH6 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RPAP1Q9BWH6 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RPAP1Q9BWH6 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
RPAP1Q9BWH6 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RPAP1Q9BWH6 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RPAP1Q9BWH6 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RPAP1Q9BWH6 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
RPAP1Q9BWH6 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC20.52■□□□□ 0.88
RPAP1Q9BWH6 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RPAP1Q9BWH6 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC20.52■□□□□ 0.88
RPAP1Q9BWH6 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
RPAP1Q9BWH6 MED16-214ENST00000617672 554 ntTSL 5 BASIC20.52■□□□□ 0.88
RPAP1Q9BWH6 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RPAP1Q9BWH6 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RPAP1Q9BWH6 PI4KAP1-204ENST00000612579 1703 ntBASIC20.52■□□□□ 0.88
RPAP1Q9BWH6 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
RPAP1Q9BWH6 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
RPAP1Q9BWH6 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RPAP1Q9BWH6 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RPAP1Q9BWH6 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RPAP1Q9BWH6 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RPAP1Q9BWH6 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RPAP1Q9BWH6 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RPAP1Q9BWH6 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
RPAP1Q9BWH6 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
RPAP1Q9BWH6 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC20.52■□□□□ 0.87
RPAP1Q9BWH6 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
RPAP1Q9BWH6 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
RPAP1Q9BWH6 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
RPAP1Q9BWH6 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
RPAP1Q9BWH6 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
RPAP1Q9BWH6 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RPAP1Q9BWH6 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RPAP1Q9BWH6 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RPAP1Q9BWH6 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC20.51■□□□□ 0.87
RPAP1Q9BWH6 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
RPAP1Q9BWH6 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
RPAP1Q9BWH6 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
RPAP1Q9BWH6 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC20.51■□□□□ 0.87
RPAP1Q9BWH6 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RPAP1Q9BWH6 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC20.51■□□□□ 0.87
RPAP1Q9BWH6 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RPAP1Q9BWH6 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RPAP1Q9BWH6 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
RPAP1Q9BWH6 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RPAP1Q9BWH6 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
RPAP1Q9BWH6 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC20.51■□□□□ 0.87
RPAP1Q9BWH6 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
RPAP1Q9BWH6 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
RPAP1Q9BWH6 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RPAP1Q9BWH6 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC20.5■□□□□ 0.87
RPAP1Q9BWH6 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RPAP1Q9BWH6 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RPAP1Q9BWH6 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RPAP1Q9BWH6 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
RPAP1Q9BWH6 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RPAP1Q9BWH6 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RPAP1Q9BWH6 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RPAP1Q9BWH6 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RPAP1Q9BWH6 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC20.5■□□□□ 0.87
RPAP1Q9BWH6 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
RPAP1Q9BWH6 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms