Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.72■□□□□ 0.43
SMOQ99835 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMOQ99835 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMOQ99835 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.72■□□□□ 0.43
SMOQ99835 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMOQ99835 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMOQ99835 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.72■□□□□ 0.43
SMOQ99835 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SMOQ99835 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SMOQ99835 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.72■□□□□ 0.43
SMOQ99835 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.72■□□□□ 0.43
SMOQ99835 AC013467.2-201ENST00000605472 835 ntBASIC17.72■□□□□ 0.43
SMOQ99835 AC099522.2-201ENST00000607001 744 ntBASIC17.72■□□□□ 0.43
SMOQ99835 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMOQ99835 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMOQ99835 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMOQ99835 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SMOQ99835 ELL2P1-201ENST00000413990 1906 ntBASIC17.72■□□□□ 0.43
SMOQ99835 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.72■□□□□ 0.43
SMOQ99835 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.72■□□□□ 0.43
SMOQ99835 LINC00895-201ENST00000629028 1637 ntBASIC17.72■□□□□ 0.43
SMOQ99835 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.72■□□□□ 0.43
SMOQ99835 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SMOQ99835 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMOQ99835 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SMOQ99835 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SMOQ99835 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.71■□□□□ 0.43
SMOQ99835 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SMOQ99835 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMOQ99835 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SMOQ99835 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMOQ99835 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.71■□□□□ 0.43
SMOQ99835 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMOQ99835 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SMOQ99835 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.71■□□□□ 0.43
SMOQ99835 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMOQ99835 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SMOQ99835 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMOQ99835 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMOQ99835 RNU1-129P-201ENST00000384064 167 ntBASIC17.71■□□□□ 0.43
SMOQ99835 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMOQ99835 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.71■□□□□ 0.43
SMOQ99835 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.71■□□□□ 0.43
SMOQ99835 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SMOQ99835 U1.21-201ENST00000580816 167 ntBASIC17.71■□□□□ 0.43
SMOQ99835 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.71■□□□□ 0.43
SMOQ99835 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.71■□□□□ 0.43
SMOQ99835 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.71■□□□□ 0.43
SMOQ99835 AP001350.2-201ENST00000625104 1094 ntBASIC17.71■□□□□ 0.43
SMOQ99835 AC134684.3-201ENST00000641758 218 ntBASIC17.71■□□□□ 0.43
SMOQ99835 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMOQ99835 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SMOQ99835 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.71■□□□□ 0.43
SMOQ99835 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.71■□□□□ 0.43
SMOQ99835 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMOQ99835 AC105020.1-201ENST00000435356 2205 ntBASIC17.71■□□□□ 0.43
SMOQ99835 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.71■□□□□ 0.42
SMOQ99835 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.71■□□□□ 0.42
SMOQ99835 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
SMOQ99835 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
SMOQ99835 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
SMOQ99835 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMOQ99835 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SMOQ99835 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMOQ99835 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.7■□□□□ 0.42
SMOQ99835 AL671710.1-201ENST00000610245 2349 ntBASIC17.7■□□□□ 0.42
SMOQ99835 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMOQ99835 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMOQ99835 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SMOQ99835 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMOQ99835 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMOQ99835 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.7■□□□□ 0.42
SMOQ99835 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.7■□□□□ 0.42
SMOQ99835 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.7■□□□□ 0.42
SMOQ99835 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.7■□□□□ 0.42
SMOQ99835 CEND1P1-201ENST00000451006 455 ntBASIC17.7■□□□□ 0.42
SMOQ99835 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.7■□□□□ 0.42
SMOQ99835 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMOQ99835 AC112191.1-201ENST00000523689 701 ntBASIC17.7■□□□□ 0.42
SMOQ99835 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.7■□□□□ 0.42
SMOQ99835 AL009183.1-201ENST00000603760 355 ntBASIC17.7■□□□□ 0.42
SMOQ99835 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.7■□□□□ 0.42
SMOQ99835 AL691403.2-201ENST00000618460 490 ntBASIC17.7■□□□□ 0.42
SMOQ99835 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMOQ99835 SNX33P1-201ENST00000592116 1762 ntBASIC17.7■□□□□ 0.42
SMOQ99835 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SMOQ99835 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SMOQ99835 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SMOQ99835 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMOQ99835 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SMOQ99835 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMOQ99835 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
SMOQ99835 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMOQ99835 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.7■□□□□ 0.42
SMOQ99835 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMOQ99835 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMOQ99835 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SMOQ99835 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SMOQ99835 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SMOQ99835 AL391256.1-201ENST00000443260 1855 ntBASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms