Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF48Q96MX3 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF48Q96MX3 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
ZNF48Q96MX3 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF48Q96MX3 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC13.81□□□□□ -0.2
ZNF48Q96MX3 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF48Q96MX3 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF48Q96MX3 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF48Q96MX3 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC13.81□□□□□ -0.2
ZNF48Q96MX3 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC13.81□□□□□ -0.2
ZNF48Q96MX3 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF48Q96MX3 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC13.81□□□□□ -0.2
ZNF48Q96MX3 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF48Q96MX3 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF48Q96MX3 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF48Q96MX3 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF48Q96MX3 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF48Q96MX3 AL139400.1-201ENST00000366220 510 ntBASIC13.81□□□□□ -0.2
ZNF48Q96MX3 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC13.81□□□□□ -0.2
ZNF48Q96MX3 TSEN15P1-201ENST00000423257 515 ntBASIC13.81□□□□□ -0.2
ZNF48Q96MX3 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC13.81□□□□□ -0.2
ZNF48Q96MX3 AL513480.1-201ENST00000451731 511 ntBASIC13.81□□□□□ -0.2
ZNF48Q96MX3 AC087163.2-201ENST00000457299 853 ntBASIC13.81□□□□□ -0.2
ZNF48Q96MX3 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC13.81□□□□□ -0.2
ZNF48Q96MX3 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.81□□□□□ -0.2
ZNF48Q96MX3 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC13.81□□□□□ -0.2
ZNF48Q96MX3 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC13.81□□□□□ -0.2
ZNF48Q96MX3 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
ZNF48Q96MX3 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC13.81□□□□□ -0.2
ZNF48Q96MX3 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC13.81□□□□□ -0.2
ZNF48Q96MX3 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC13.81□□□□□ -0.2
ZNF48Q96MX3 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF48Q96MX3 AC093028.1-201ENST00000622998 982 ntBASIC13.81□□□□□ -0.2
ZNF48Q96MX3 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC13.81□□□□□ -0.2
ZNF48Q96MX3 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
ZNF48Q96MX3 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF48Q96MX3 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF48Q96MX3 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC13.81□□□□□ -0.2
ZNF48Q96MX3 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF48Q96MX3 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC13.81□□□□□ -0.2
ZNF48Q96MX3 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF48Q96MX3 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC13.81□□□□□ -0.2
ZNF48Q96MX3 AC141586.5-201ENST00000624546 2050 ntBASIC13.81□□□□□ -0.2
ZNF48Q96MX3 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
ZNF48Q96MX3 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
ZNF48Q96MX3 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
ZNF48Q96MX3 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
ZNF48Q96MX3 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF48Q96MX3 AC016396.2-201ENST00000562575 1417 ntBASIC13.81□□□□□ -0.2
ZNF48Q96MX3 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF48Q96MX3 PRORSD1P-202ENST00000563365 2154 ntBASIC13.81□□□□□ -0.2
ZNF48Q96MX3 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF48Q96MX3 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF48Q96MX3 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC13.8□□□□□ -0.2
ZNF48Q96MX3 CYP51A1P2-201ENST00000419457 1499 ntBASIC13.8□□□□□ -0.2
ZNF48Q96MX3 PP12613-201ENST00000424958 2230 ntBASIC13.8□□□□□ -0.2
ZNF48Q96MX3 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF48Q96MX3 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC13.8□□□□□ -0.2
ZNF48Q96MX3 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF48Q96MX3 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF48Q96MX3 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF48Q96MX3 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
ZNF48Q96MX3 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF48Q96MX3 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF48Q96MX3 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
ZNF48Q96MX3 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC13.8□□□□□ -0.2
ZNF48Q96MX3 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC13.8□□□□□ -0.2
ZNF48Q96MX3 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF48Q96MX3 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
ZNF48Q96MX3 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
ZNF48Q96MX3 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF48Q96MX3 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF48Q96MX3 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF48Q96MX3 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF48Q96MX3 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF48Q96MX3 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
ZNF48Q96MX3 DDT-204ENST00000404092 805 ntTSL 3 BASIC13.8□□□□□ -0.2
ZNF48Q96MX3 AC004461.1-201ENST00000412461 403 ntBASIC13.8□□□□□ -0.2
ZNF48Q96MX3 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC13.8□□□□□ -0.2
ZNF48Q96MX3 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF48Q96MX3 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC13.8□□□□□ -0.2
ZNF48Q96MX3 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC13.8□□□□□ -0.2
ZNF48Q96MX3 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC13.8□□□□□ -0.2
ZNF48Q96MX3 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF48Q96MX3 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC13.8□□□□□ -0.2
ZNF48Q96MX3 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC13.8□□□□□ -0.2
ZNF48Q96MX3 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC13.8□□□□□ -0.2
ZNF48Q96MX3 ORC5-208ENST00000626700 344 ntTSL 3 BASIC13.8□□□□□ -0.2
ZNF48Q96MX3 AL513210.1-201ENST00000629608 234 ntBASIC13.8□□□□□ -0.2
ZNF48Q96MX3 AC105339.1-204ENST00000636249 355 ntBASIC13.8□□□□□ -0.2
ZNF48Q96MX3 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF48Q96MX3 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
ZNF48Q96MX3 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
ZNF48Q96MX3 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF48Q96MX3 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC13.8□□□□□ -0.2
ZNF48Q96MX3 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC13.8□□□□□ -0.2
ZNF48Q96MX3 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.8□□□□□ -0.2
ZNF48Q96MX3 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF48Q96MX3 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF48Q96MX3 GOLGA6L17P-202ENST00000614358 1398 ntBASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms