Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBE2E3Q969T4 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.33■□□□□ 0.2
UBE2E3Q969T4 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBE2E3Q969T4 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
UBE2E3Q969T4 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBE2E3Q969T4 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
UBE2E3Q969T4 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.33■□□□□ 0.2
UBE2E3Q969T4 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBE2E3Q969T4 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
UBE2E3Q969T4 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.33■□□□□ 0.2
UBE2E3Q969T4 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.33■□□□□ 0.2
UBE2E3Q969T4 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBE2E3Q969T4 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBE2E3Q969T4 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBE2E3Q969T4 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
UBE2E3Q969T4 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.32■□□□□ 0.2
UBE2E3Q969T4 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
UBE2E3Q969T4 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBE2E3Q969T4 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.32■□□□□ 0.2
UBE2E3Q969T4 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBE2E3Q969T4 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBE2E3Q969T4 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
UBE2E3Q969T4 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBE2E3Q969T4 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
UBE2E3Q969T4 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
UBE2E3Q969T4 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBE2E3Q969T4 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBE2E3Q969T4 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBE2E3Q969T4 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.32■□□□□ 0.2
UBE2E3Q969T4 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBE2E3Q969T4 ELK2BP-201ENST00000415014 1224 ntBASIC16.32■□□□□ 0.2
UBE2E3Q969T4 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBE2E3Q969T4 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBE2E3Q969T4 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBE2E3Q969T4 KRT18P27-201ENST00000427733 1299 ntBASIC16.32■□□□□ 0.2
UBE2E3Q969T4 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
UBE2E3Q969T4 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBE2E3Q969T4 AC136632.2-201ENST00000512891 861 ntBASIC16.32■□□□□ 0.2
UBE2E3Q969T4 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBE2E3Q969T4 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.32■□□□□ 0.2
UBE2E3Q969T4 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.32■□□□□ 0.2
UBE2E3Q969T4 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.32■□□□□ 0.2
UBE2E3Q969T4 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.32■□□□□ 0.2
UBE2E3Q969T4 RN7SL510P-201ENST00000581311 263 ntBASIC16.32■□□□□ 0.2
UBE2E3Q969T4 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.32■□□□□ 0.2
UBE2E3Q969T4 AC006504.4-201ENST00000592118 1568 ntBASIC16.32■□□□□ 0.2
UBE2E3Q969T4 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.32■□□□□ 0.2
UBE2E3Q969T4 AC008735.5-201ENST00000623544 497 ntBASIC16.32■□□□□ 0.2
UBE2E3Q969T4 AC011676.5-201ENST00000624864 2660 ntBASIC16.32■□□□□ 0.2
UBE2E3Q969T4 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBE2E3Q969T4 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBE2E3Q969T4 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
UBE2E3Q969T4 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBE2E3Q969T4 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.32■□□□□ 0.2
UBE2E3Q969T4 PCDHB17P-201ENST00000539533 2393 ntBASIC16.31■□□□□ 0.2
UBE2E3Q969T4 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBE2E3Q969T4 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBE2E3Q969T4 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBE2E3Q969T4 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBE2E3Q969T4 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBE2E3Q969T4 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
UBE2E3Q969T4 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
UBE2E3Q969T4 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
UBE2E3Q969T4 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
UBE2E3Q969T4 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
UBE2E3Q969T4 TOP3BP1-201ENST00000420768 1380 ntBASIC16.31■□□□□ 0.2
UBE2E3Q969T4 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBE2E3Q969T4 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBE2E3Q969T4 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBE2E3Q969T4 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
UBE2E3Q969T4 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.31■□□□□ 0.2
UBE2E3Q969T4 AC105339.3-201ENST00000560043 636 ntBASIC16.31■□□□□ 0.2
UBE2E3Q969T4 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
UBE2E3Q969T4 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
UBE2E3Q969T4 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.31■□□□□ 0.2
UBE2E3Q969T4 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.31■□□□□ 0.2
UBE2E3Q969T4 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
UBE2E3Q969T4 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBE2E3Q969T4 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBE2E3Q969T4 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
UBE2E3Q969T4 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.31■□□□□ 0.2
UBE2E3Q969T4 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.31■□□□□ 0.2
UBE2E3Q969T4 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.31■□□□□ 0.2
UBE2E3Q969T4 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
UBE2E3Q969T4 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBE2E3Q969T4 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.31■□□□□ 0.2
UBE2E3Q969T4 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
UBE2E3Q969T4 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBE2E3Q969T4 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBE2E3Q969T4 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
UBE2E3Q969T4 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.3■□□□□ 0.2
UBE2E3Q969T4 LINC00895-201ENST00000629028 1637 ntBASIC16.3■□□□□ 0.2
UBE2E3Q969T4 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBE2E3Q969T4 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
UBE2E3Q969T4 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBE2E3Q969T4 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
UBE2E3Q969T4 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.3■□□□□ 0.2
UBE2E3Q969T4 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
UBE2E3Q969T4 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBE2E3Q969T4 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms