Protein–RNA interactions for Protein: Q969G3

SMARCE1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, humanhuman

Predictions only

Length 411 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1Q969G3 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCE1Q969G3 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC19.17■□□□□ 0.66
SMARCE1Q969G3 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SMARCE1Q969G3 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCE1Q969G3 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCE1Q969G3 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCE1Q969G3 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCE1Q969G3 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
SMARCE1Q969G3 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCE1Q969G3 ACTG1P4-201ENST00000425123 1122 ntBASIC19.17■□□□□ 0.66
SMARCE1Q969G3 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SMARCE1Q969G3 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.17■□□□□ 0.66
SMARCE1Q969G3 NUS1P1-201ENST00000446295 882 ntBASIC19.17■□□□□ 0.66
SMARCE1Q969G3 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCE1Q969G3 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCE1Q969G3 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.17■□□□□ 0.66
SMARCE1Q969G3 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCE1Q969G3 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCE1Q969G3 AC114341.1-201ENST00000618070 349 ntBASIC19.17■□□□□ 0.66
SMARCE1Q969G3 AP000867.4-201ENST00000641616 219 ntBASIC19.17■□□□□ 0.66
SMARCE1Q969G3 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCE1Q969G3 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
SMARCE1Q969G3 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCE1Q969G3 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCE1Q969G3 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCE1Q969G3 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCE1Q969G3 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCE1Q969G3 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SMARCE1Q969G3 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC19.17■□□□□ 0.66
SMARCE1Q969G3 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCE1Q969G3 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCE1Q969G3 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMARCE1Q969G3 AC079328.2-201ENST00000561241 3354 ntBASIC19.16■□□□□ 0.66
SMARCE1Q969G3 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
SMARCE1Q969G3 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMARCE1Q969G3 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC19.16■□□□□ 0.66
SMARCE1Q969G3 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC19.16■□□□□ 0.66
SMARCE1Q969G3 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMARCE1Q969G3 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMARCE1Q969G3 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SMARCE1Q969G3 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMARCE1Q969G3 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMARCE1Q969G3 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC19.16■□□□□ 0.66
SMARCE1Q969G3 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SMARCE1Q969G3 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC19.16■□□□□ 0.66
SMARCE1Q969G3 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMARCE1Q969G3 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMARCE1Q969G3 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
SMARCE1Q969G3 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.16■□□□□ 0.66
SMARCE1Q969G3 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SMARCE1Q969G3 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SMARCE1Q969G3 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.16■□□□□ 0.66
SMARCE1Q969G3 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.16■□□□□ 0.66
SMARCE1Q969G3 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.16■□□□□ 0.66
SMARCE1Q969G3 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMARCE1Q969G3 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.16■□□□□ 0.66
SMARCE1Q969G3 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SMARCE1Q969G3 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SMARCE1Q969G3 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SMARCE1Q969G3 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SMARCE1Q969G3 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC19.16■□□□□ 0.66
SMARCE1Q969G3 TUBB8P12-201ENST00000308911 1335 ntBASIC19.16■□□□□ 0.66
SMARCE1Q969G3 TUBB7P-202ENST00000428444 1305 ntBASIC19.16■□□□□ 0.66
SMARCE1Q969G3 TUBB8P7-204ENST00000567960 1332 ntBASIC19.16■□□□□ 0.66
SMARCE1Q969G3 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC19.16■□□□□ 0.66
SMARCE1Q969G3 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SMARCE1Q969G3 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
SMARCE1Q969G3 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMARCE1Q969G3 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMARCE1Q969G3 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC19.16■□□□□ 0.66
SMARCE1Q969G3 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SMARCE1Q969G3 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMARCE1Q969G3 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
SMARCE1Q969G3 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
SMARCE1Q969G3 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SMARCE1Q969G3 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SMARCE1Q969G3 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC19.15■□□□□ 0.66
SMARCE1Q969G3 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC19.15■□□□□ 0.66
SMARCE1Q969G3 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SMARCE1Q969G3 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SMARCE1Q969G3 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC19.15■□□□□ 0.66
SMARCE1Q969G3 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC19.15■□□□□ 0.66
SMARCE1Q969G3 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SMARCE1Q969G3 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
SMARCE1Q969G3 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC19.15■□□□□ 0.66
SMARCE1Q969G3 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
SMARCE1Q969G3 SPDYE21P-201ENST00000413323 827 ntBASIC19.15■□□□□ 0.66
SMARCE1Q969G3 POM121L3P-201ENST00000419331 1163 ntBASIC19.15■□□□□ 0.66
SMARCE1Q969G3 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.15■□□□□ 0.66
SMARCE1Q969G3 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMARCE1Q969G3 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SMARCE1Q969G3 AP002490.2-201ENST00000524791 560 ntBASIC19.15■□□□□ 0.66
SMARCE1Q969G3 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC19.15■□□□□ 0.66
SMARCE1Q969G3 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.15■□□□□ 0.66
SMARCE1Q969G3 COX5A-204ENST00000567270 579 ntTSL 3 BASIC19.15■□□□□ 0.66
SMARCE1Q969G3 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC19.15■□□□□ 0.66
SMARCE1Q969G3 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMARCE1Q969G3 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SMARCE1Q969G3 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.15■□□□□ 0.66
SMARCE1Q969G3 WT1-209ENST00000530998 2421 ntTSL 2 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms