Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PTCD2Q8WV60 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTCD2Q8WV60 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PTCD2Q8WV60 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PTCD2Q8WV60 AC046158.3-201ENST00000624947 2558 ntBASIC17.23■□□□□ 0.35
PTCD2Q8WV60 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
PTCD2Q8WV60 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.23■□□□□ 0.35
PTCD2Q8WV60 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTCD2Q8WV60 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTCD2Q8WV60 AP002414.1-201ENST00000391405 1147 ntBASIC17.23■□□□□ 0.35
PTCD2Q8WV60 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.23■□□□□ 0.35
PTCD2Q8WV60 AC098831.1-202ENST00000438821 336 ntBASIC17.23■□□□□ 0.35
PTCD2Q8WV60 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.23■□□□□ 0.35
PTCD2Q8WV60 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.23■□□□□ 0.35
PTCD2Q8WV60 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.23■□□□□ 0.35
PTCD2Q8WV60 AC107308.1-201ENST00000615897 301 ntBASIC17.23■□□□□ 0.35
PTCD2Q8WV60 AC008735.5-201ENST00000623544 497 ntBASIC17.23■□□□□ 0.35
PTCD2Q8WV60 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC17.23■□□□□ 0.35
PTCD2Q8WV60 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PTCD2Q8WV60 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTCD2Q8WV60 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTCD2Q8WV60 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PTCD2Q8WV60 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTCD2Q8WV60 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.23■□□□□ 0.35
PTCD2Q8WV60 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.23■□□□□ 0.35
PTCD2Q8WV60 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
PTCD2Q8WV60 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PTCD2Q8WV60 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTCD2Q8WV60 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
PTCD2Q8WV60 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.22■□□□□ 0.35
PTCD2Q8WV60 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTCD2Q8WV60 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTCD2Q8WV60 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.22■□□□□ 0.35
PTCD2Q8WV60 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PTCD2Q8WV60 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTCD2Q8WV60 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
PTCD2Q8WV60 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.22■□□□□ 0.35
PTCD2Q8WV60 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PTCD2Q8WV60 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PTCD2Q8WV60 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.22■□□□□ 0.35
PTCD2Q8WV60 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC17.22■□□□□ 0.35
PTCD2Q8WV60 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.22■□□□□ 0.35
PTCD2Q8WV60 IGHV3-22-201ENST00000520721 359 ntBASIC17.22■□□□□ 0.35
PTCD2Q8WV60 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.22■□□□□ 0.35
PTCD2Q8WV60 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.22■□□□□ 0.35
PTCD2Q8WV60 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.22■□□□□ 0.35
PTCD2Q8WV60 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.22■□□□□ 0.35
PTCD2Q8WV60 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTCD2Q8WV60 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PTCD2Q8WV60 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTCD2Q8WV60 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTCD2Q8WV60 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTCD2Q8WV60 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTCD2Q8WV60 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTCD2Q8WV60 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.22■□□□□ 0.35
PTCD2Q8WV60 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTCD2Q8WV60 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.22■□□□□ 0.35
PTCD2Q8WV60 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTCD2Q8WV60 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PTCD2Q8WV60 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PTCD2Q8WV60 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTCD2Q8WV60 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.22■□□□□ 0.35
PTCD2Q8WV60 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.21■□□□□ 0.35
PTCD2Q8WV60 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.21■□□□□ 0.35
PTCD2Q8WV60 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTCD2Q8WV60 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.21■□□□□ 0.35
PTCD2Q8WV60 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTCD2Q8WV60 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
PTCD2Q8WV60 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
PTCD2Q8WV60 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
PTCD2Q8WV60 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.21■□□□□ 0.35
PTCD2Q8WV60 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTCD2Q8WV60 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTCD2Q8WV60 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.21■□□□□ 0.35
PTCD2Q8WV60 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PTCD2Q8WV60 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PTCD2Q8WV60 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTCD2Q8WV60 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTCD2Q8WV60 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTCD2Q8WV60 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PTCD2Q8WV60 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.21■□□□□ 0.35
PTCD2Q8WV60 RPL13AP23-201ENST00000480739 586 ntBASIC17.21■□□□□ 0.35
PTCD2Q8WV60 AC093909.1-201ENST00000504731 1122 ntBASIC17.21■□□□□ 0.35
PTCD2Q8WV60 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.21■□□□□ 0.35
PTCD2Q8WV60 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.21■□□□□ 0.35
PTCD2Q8WV60 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.21■□□□□ 0.35
PTCD2Q8WV60 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.21■□□□□ 0.35
PTCD2Q8WV60 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PTCD2Q8WV60 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PTCD2Q8WV60 AL353135.1-201ENST00000606729 504 ntBASIC17.21■□□□□ 0.35
PTCD2Q8WV60 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTCD2Q8WV60 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTCD2Q8WV60 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.21■□□□□ 0.35
PTCD2Q8WV60 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTCD2Q8WV60 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PTCD2Q8WV60 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PTCD2Q8WV60 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.21■□□□□ 0.34
PTCD2Q8WV60 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
PTCD2Q8WV60 NCF1C-201ENST00000438382 1427 ntBASIC17.21■□□□□ 0.34
PTCD2Q8WV60 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms