Protein–RNA interactions for Protein: Q8NHY6

ZFP28, Zinc finger protein 28 homolog, humanhuman

Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFP28Q8NHY6 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ZFP28Q8NHY6 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ZFP28Q8NHY6 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZFP28Q8NHY6 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.44■□□□□ 0.22
ZFP28Q8NHY6 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZFP28Q8NHY6 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.44■□□□□ 0.22
ZFP28Q8NHY6 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ZFP28Q8NHY6 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZFP28Q8NHY6 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZFP28Q8NHY6 AC116353.5-201ENST00000638148 1699 ntBASIC16.44■□□□□ 0.22
ZFP28Q8NHY6 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZFP28Q8NHY6 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZFP28Q8NHY6 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZFP28Q8NHY6 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZFP28Q8NHY6 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.44■□□□□ 0.22
ZFP28Q8NHY6 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZFP28Q8NHY6 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ZFP28Q8NHY6 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.44■□□□□ 0.22
ZFP28Q8NHY6 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.44■□□□□ 0.22
ZFP28Q8NHY6 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.44■□□□□ 0.22
ZFP28Q8NHY6 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
ZFP28Q8NHY6 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZFP28Q8NHY6 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ZFP28Q8NHY6 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ZFP28Q8NHY6 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.44■□□□□ 0.22
ZFP28Q8NHY6 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.44■□□□□ 0.22
ZFP28Q8NHY6 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ZFP28Q8NHY6 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.44■□□□□ 0.22
ZFP28Q8NHY6 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.44■□□□□ 0.22
ZFP28Q8NHY6 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.44■□□□□ 0.22
ZFP28Q8NHY6 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.44■□□□□ 0.22
ZFP28Q8NHY6 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
ZFP28Q8NHY6 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ZFP28Q8NHY6 AC011467.2-201ENST00000598425 242 ntBASIC16.44■□□□□ 0.22
ZFP28Q8NHY6 LINC02228-204ENST00000642115 2962 ntBASIC16.44■□□□□ 0.22
ZFP28Q8NHY6 AC092068.3-201ENST00000587894 2016 ntBASIC16.44■□□□□ 0.22
ZFP28Q8NHY6 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZFP28Q8NHY6 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZFP28Q8NHY6 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
ZFP28Q8NHY6 AC024909.3-201ENST00000611513 2257 ntBASIC16.44■□□□□ 0.22
ZFP28Q8NHY6 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZFP28Q8NHY6 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZFP28Q8NHY6 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZFP28Q8NHY6 CYP2T1P-202ENST00000641596 2535 ntBASIC16.44■□□□□ 0.22
ZFP28Q8NHY6 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.44■□□□□ 0.22
ZFP28Q8NHY6 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.44■□□□□ 0.22
ZFP28Q8NHY6 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZFP28Q8NHY6 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.43■□□□□ 0.22
ZFP28Q8NHY6 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZFP28Q8NHY6 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZFP28Q8NHY6 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZFP28Q8NHY6 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
ZFP28Q8NHY6 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZFP28Q8NHY6 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
ZFP28Q8NHY6 AL513523.2-202ENST00000427283 2040 ntBASIC16.43■□□□□ 0.22
ZFP28Q8NHY6 AL049757.1-201ENST00000616842 1596 ntBASIC16.43■□□□□ 0.22
ZFP28Q8NHY6 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.43■□□□□ 0.22
ZFP28Q8NHY6 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.43■□□□□ 0.22
ZFP28Q8NHY6 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.43■□□□□ 0.22
ZFP28Q8NHY6 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZFP28Q8NHY6 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.43■□□□□ 0.22
ZFP28Q8NHY6 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ZFP28Q8NHY6 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.43■□□□□ 0.22
ZFP28Q8NHY6 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZFP28Q8NHY6 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZFP28Q8NHY6 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZFP28Q8NHY6 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZFP28Q8NHY6 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZFP28Q8NHY6 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZFP28Q8NHY6 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZFP28Q8NHY6 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.43■□□□□ 0.22
ZFP28Q8NHY6 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.43■□□□□ 0.22
ZFP28Q8NHY6 TOB2P1-201ENST00000469761 992 ntBASIC16.43■□□□□ 0.22
ZFP28Q8NHY6 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.43■□□□□ 0.22
ZFP28Q8NHY6 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.43■□□□□ 0.22
ZFP28Q8NHY6 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.43■□□□□ 0.22
ZFP28Q8NHY6 TPSP2-201ENST00000561760 610 ntBASIC16.43■□□□□ 0.22
ZFP28Q8NHY6 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZFP28Q8NHY6 STK25P1-201ENST00000585406 838 ntBASIC16.43■□□□□ 0.22
ZFP28Q8NHY6 AP002414.4-201ENST00000589764 1148 ntBASIC16.43■□□□□ 0.22
ZFP28Q8NHY6 AC069148.1-201ENST00000608741 768 ntBASIC16.43■□□□□ 0.22
ZFP28Q8NHY6 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.43■□□□□ 0.22
ZFP28Q8NHY6 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.43■□□□□ 0.22
ZFP28Q8NHY6 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZFP28Q8NHY6 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZFP28Q8NHY6 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZFP28Q8NHY6 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
ZFP28Q8NHY6 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
ZFP28Q8NHY6 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.43■□□□□ 0.22
ZFP28Q8NHY6 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZFP28Q8NHY6 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
ZFP28Q8NHY6 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZFP28Q8NHY6 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
ZFP28Q8NHY6 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.43■□□□□ 0.22
ZFP28Q8NHY6 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.43■□□□□ 0.22
ZFP28Q8NHY6 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
ZFP28Q8NHY6 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZFP28Q8NHY6 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZFP28Q8NHY6 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
ZFP28Q8NHY6 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms