Protein–RNA interactions for Protein: Q8NHX4

SPATA3, Spermatogenesis-associated protein 3, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA3Q8NHX4 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
SPATA3Q8NHX4 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
SPATA3Q8NHX4 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
SPATA3Q8NHX4 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC13.19□□□□□ -0.3
SPATA3Q8NHX4 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.19□□□□□ -0.3
SPATA3Q8NHX4 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SPATA3Q8NHX4 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC13.19□□□□□ -0.3
SPATA3Q8NHX4 AGER-203ENST00000375065 665 ntTSL 2 BASIC13.19□□□□□ -0.3
SPATA3Q8NHX4 HMGA1P7-201ENST00000406908 502 ntBASIC13.19□□□□□ -0.3
SPATA3Q8NHX4 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.19□□□□□ -0.3
SPATA3Q8NHX4 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
SPATA3Q8NHX4 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC13.19□□□□□ -0.3
SPATA3Q8NHX4 AC087163.2-201ENST00000457299 853 ntBASIC13.19□□□□□ -0.3
SPATA3Q8NHX4 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC13.19□□□□□ -0.3
SPATA3Q8NHX4 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.19□□□□□ -0.3
SPATA3Q8NHX4 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC13.19□□□□□ -0.3
SPATA3Q8NHX4 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.19□□□□□ -0.3
SPATA3Q8NHX4 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC13.19□□□□□ -0.3
SPATA3Q8NHX4 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.19□□□□□ -0.3
SPATA3Q8NHX4 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC13.19□□□□□ -0.3
SPATA3Q8NHX4 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC13.19□□□□□ -0.3
SPATA3Q8NHX4 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.19□□□□□ -0.3
SPATA3Q8NHX4 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC13.19□□□□□ -0.3
SPATA3Q8NHX4 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SPATA3Q8NHX4 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
SPATA3Q8NHX4 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SPATA3Q8NHX4 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
SPATA3Q8NHX4 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SPATA3Q8NHX4 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SPATA3Q8NHX4 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SPATA3Q8NHX4 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
SPATA3Q8NHX4 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SPATA3Q8NHX4 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPATA3Q8NHX4 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
SPATA3Q8NHX4 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SPATA3Q8NHX4 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC13.18□□□□□ -0.3
SPATA3Q8NHX4 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC13.18□□□□□ -0.3
SPATA3Q8NHX4 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
SPATA3Q8NHX4 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPATA3Q8NHX4 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
SPATA3Q8NHX4 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SPATA3Q8NHX4 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPATA3Q8NHX4 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SPATA3Q8NHX4 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPATA3Q8NHX4 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPATA3Q8NHX4 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
SPATA3Q8NHX4 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SPATA3Q8NHX4 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC13.18□□□□□ -0.3
SPATA3Q8NHX4 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPATA3Q8NHX4 BTBD6P1-201ENST00000412176 1267 ntBASIC13.18□□□□□ -0.3
SPATA3Q8NHX4 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPATA3Q8NHX4 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.18□□□□□ -0.3
SPATA3Q8NHX4 CTBP2P5-201ENST00000454986 1264 ntBASIC13.18□□□□□ -0.3
SPATA3Q8NHX4 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
SPATA3Q8NHX4 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.18□□□□□ -0.3
SPATA3Q8NHX4 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.18□□□□□ -0.3
SPATA3Q8NHX4 HNRNPUP1-201ENST00000554987 333 ntBASIC13.18□□□□□ -0.3
SPATA3Q8NHX4 AL365330.1-201ENST00000607459 531 ntBASIC13.18□□□□□ -0.3
SPATA3Q8NHX4 U62317.3-201ENST00000608319 855 ntBASIC13.18□□□□□ -0.3
SPATA3Q8NHX4 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC13.18□□□□□ -0.3
SPATA3Q8NHX4 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.18□□□□□ -0.3
SPATA3Q8NHX4 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
SPATA3Q8NHX4 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC13.18□□□□□ -0.3
SPATA3Q8NHX4 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPATA3Q8NHX4 PXK-206ENST00000463280 2825 ntTSL 2 BASIC13.18□□□□□ -0.3
SPATA3Q8NHX4 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPATA3Q8NHX4 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
SPATA3Q8NHX4 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
SPATA3Q8NHX4 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
SPATA3Q8NHX4 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
SPATA3Q8NHX4 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPATA3Q8NHX4 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPATA3Q8NHX4 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPATA3Q8NHX4 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC13.17□□□□□ -0.3
SPATA3Q8NHX4 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC13.17□□□□□ -0.3
SPATA3Q8NHX4 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPATA3Q8NHX4 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPATA3Q8NHX4 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPATA3Q8NHX4 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SPATA3Q8NHX4 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SPATA3Q8NHX4 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPATA3Q8NHX4 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPATA3Q8NHX4 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPATA3Q8NHX4 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SPATA3Q8NHX4 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC13.17□□□□□ -0.3
SPATA3Q8NHX4 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC13.17□□□□□ -0.3
SPATA3Q8NHX4 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
SPATA3Q8NHX4 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.17□□□□□ -0.3
SPATA3Q8NHX4 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPATA3Q8NHX4 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC13.17□□□□□ -0.3
SPATA3Q8NHX4 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPATA3Q8NHX4 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPATA3Q8NHX4 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
SPATA3Q8NHX4 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SPATA3Q8NHX4 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SPATA3Q8NHX4 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SPATA3Q8NHX4 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPATA3Q8NHX4 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC13.17□□□□□ -0.3
SPATA3Q8NHX4 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPATA3Q8NHX4 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 205.1 ms