Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
SIMC1Q8NDZ2 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SIMC1Q8NDZ2 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SIMC1Q8NDZ2 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
SIMC1Q8NDZ2 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.04■□□□□ 0.16
SIMC1Q8NDZ2 AL590787.1-201ENST00000568856 1315 ntBASIC16.04■□□□□ 0.16
SIMC1Q8NDZ2 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SIMC1Q8NDZ2 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SIMC1Q8NDZ2 SCARNA2-201ENST00000458748 420 ntBASIC16.04■□□□□ 0.16
SIMC1Q8NDZ2 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
SIMC1Q8NDZ2 AC012640.2-201ENST00000561606 901 ntBASIC16.04■□□□□ 0.16
SIMC1Q8NDZ2 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.04■□□□□ 0.16
SIMC1Q8NDZ2 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.04■□□□□ 0.16
SIMC1Q8NDZ2 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
SIMC1Q8NDZ2 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.04■□□□□ 0.16
SIMC1Q8NDZ2 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SIMC1Q8NDZ2 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SIMC1Q8NDZ2 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SIMC1Q8NDZ2 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
SIMC1Q8NDZ2 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SIMC1Q8NDZ2 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SIMC1Q8NDZ2 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SIMC1Q8NDZ2 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SIMC1Q8NDZ2 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SIMC1Q8NDZ2 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SIMC1Q8NDZ2 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.04■□□□□ 0.16
SIMC1Q8NDZ2 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SIMC1Q8NDZ2 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.04■□□□□ 0.16
SIMC1Q8NDZ2 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SIMC1Q8NDZ2 PCDHB19P-201ENST00000570871 2371 ntBASIC16.04■□□□□ 0.16
SIMC1Q8NDZ2 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SIMC1Q8NDZ2 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SIMC1Q8NDZ2 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SIMC1Q8NDZ2 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SIMC1Q8NDZ2 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.03■□□□□ 0.16
SIMC1Q8NDZ2 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.03■□□□□ 0.16
SIMC1Q8NDZ2 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.03■□□□□ 0.16
SIMC1Q8NDZ2 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.03■□□□□ 0.16
SIMC1Q8NDZ2 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SIMC1Q8NDZ2 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SIMC1Q8NDZ2 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SIMC1Q8NDZ2 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SIMC1Q8NDZ2 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SIMC1Q8NDZ2 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.03■□□□□ 0.16
SIMC1Q8NDZ2 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SIMC1Q8NDZ2 MRPL3P1-201ENST00000400109 1033 ntBASIC16.03■□□□□ 0.16
SIMC1Q8NDZ2 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.03■□□□□ 0.16
SIMC1Q8NDZ2 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.03■□□□□ 0.16
SIMC1Q8NDZ2 FAAHP1-202ENST00000446499 1238 ntBASIC16.03■□□□□ 0.16
SIMC1Q8NDZ2 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.03■□□□□ 0.16
SIMC1Q8NDZ2 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.03■□□□□ 0.16
SIMC1Q8NDZ2 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
SIMC1Q8NDZ2 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.03■□□□□ 0.16
SIMC1Q8NDZ2 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.03■□□□□ 0.16
SIMC1Q8NDZ2 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.03■□□□□ 0.16
SIMC1Q8NDZ2 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.03■□□□□ 0.16
SIMC1Q8NDZ2 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.03■□□□□ 0.16
SIMC1Q8NDZ2 AL049840.3-201ENST00000602669 611 ntBASIC16.03■□□□□ 0.16
SIMC1Q8NDZ2 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SIMC1Q8NDZ2 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.03■□□□□ 0.16
SIMC1Q8NDZ2 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SIMC1Q8NDZ2 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SIMC1Q8NDZ2 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SIMC1Q8NDZ2 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SIMC1Q8NDZ2 AC092850.2-201ENST00000623821 2697 ntBASIC16.03■□□□□ 0.16
SIMC1Q8NDZ2 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SIMC1Q8NDZ2 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SIMC1Q8NDZ2 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
SIMC1Q8NDZ2 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
SIMC1Q8NDZ2 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SIMC1Q8NDZ2 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SIMC1Q8NDZ2 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SIMC1Q8NDZ2 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SIMC1Q8NDZ2 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SIMC1Q8NDZ2 FRMD8P1-201ENST00000440433 1524 ntBASIC16.03■□□□□ 0.16
SIMC1Q8NDZ2 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.03■□□□□ 0.16
SIMC1Q8NDZ2 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SIMC1Q8NDZ2 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SIMC1Q8NDZ2 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SIMC1Q8NDZ2 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SIMC1Q8NDZ2 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
SIMC1Q8NDZ2 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SIMC1Q8NDZ2 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SIMC1Q8NDZ2 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SIMC1Q8NDZ2 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SIMC1Q8NDZ2 NCF1C-201ENST00000438382 1427 ntBASIC16.02■□□□□ 0.16
SIMC1Q8NDZ2 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SIMC1Q8NDZ2 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SIMC1Q8NDZ2 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SIMC1Q8NDZ2 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
SIMC1Q8NDZ2 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
SIMC1Q8NDZ2 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SIMC1Q8NDZ2 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.02■□□□□ 0.16
SIMC1Q8NDZ2 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
SIMC1Q8NDZ2 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
SIMC1Q8NDZ2 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.02■□□□□ 0.16
SIMC1Q8NDZ2 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
SIMC1Q8NDZ2 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SIMC1Q8NDZ2 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.02■□□□□ 0.16
SIMC1Q8NDZ2 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms