Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 LINC00895-201ENST00000629028 1637 ntBASIC16.74■□□□□ 0.27
TRAM1L1Q8N609 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRAM1L1Q8N609 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAM1L1Q8N609 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRAM1L1Q8N609 AC023274.1-201ENST00000418278 595 ntBASIC16.73■□□□□ 0.27
TRAM1L1Q8N609 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.73■□□□□ 0.27
TRAM1L1Q8N609 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.73■□□□□ 0.27
TRAM1L1Q8N609 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAM1L1Q8N609 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.73■□□□□ 0.27
TRAM1L1Q8N609 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.73■□□□□ 0.27
TRAM1L1Q8N609 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.73■□□□□ 0.27
TRAM1L1Q8N609 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.73■□□□□ 0.27
TRAM1L1Q8N609 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.73■□□□□ 0.27
TRAM1L1Q8N609 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.73■□□□□ 0.27
TRAM1L1Q8N609 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.73■□□□□ 0.27
TRAM1L1Q8N609 AL513190.1-201ENST00000621254 727 ntBASIC16.73■□□□□ 0.27
TRAM1L1Q8N609 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.73■□□□□ 0.27
TRAM1L1Q8N609 AC092865.6-201ENST00000642101 219 ntBASIC16.73■□□□□ 0.27
TRAM1L1Q8N609 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAM1L1Q8N609 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.73■□□□□ 0.27
TRAM1L1Q8N609 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRAM1L1Q8N609 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAM1L1Q8N609 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRAM1L1Q8N609 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
TRAM1L1Q8N609 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAM1L1Q8N609 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRAM1L1Q8N609 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.73■□□□□ 0.27
TRAM1L1Q8N609 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRAM1L1Q8N609 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRAM1L1Q8N609 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.72■□□□□ 0.27
TRAM1L1Q8N609 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TRAM1L1Q8N609 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAM1L1Q8N609 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
TRAM1L1Q8N609 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAM1L1Q8N609 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TRAM1L1Q8N609 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRAM1L1Q8N609 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TRAM1L1Q8N609 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TRAM1L1Q8N609 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAM1L1Q8N609 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAM1L1Q8N609 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAM1L1Q8N609 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRAM1L1Q8N609 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAM1L1Q8N609 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.72■□□□□ 0.27
TRAM1L1Q8N609 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAM1L1Q8N609 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.72■□□□□ 0.27
TRAM1L1Q8N609 AC006277.1-201ENST00000624348 1610 ntBASIC16.72■□□□□ 0.27
TRAM1L1Q8N609 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAM1L1Q8N609 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAM1L1Q8N609 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.72■□□□□ 0.27
TRAM1L1Q8N609 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.72■□□□□ 0.27
TRAM1L1Q8N609 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.72■□□□□ 0.27
TRAM1L1Q8N609 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.72■□□□□ 0.27
TRAM1L1Q8N609 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TRAM1L1Q8N609 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.72■□□□□ 0.27
TRAM1L1Q8N609 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.72■□□□□ 0.27
TRAM1L1Q8N609 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAM1L1Q8N609 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRAM1L1Q8N609 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.72■□□□□ 0.27
TRAM1L1Q8N609 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TRAM1L1Q8N609 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAM1L1Q8N609 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAM1L1Q8N609 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRAM1L1Q8N609 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.72■□□□□ 0.27
TRAM1L1Q8N609 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRAM1L1Q8N609 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAM1L1Q8N609 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAM1L1Q8N609 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAM1L1Q8N609 AC105020.1-201ENST00000435356 2205 ntBASIC16.72■□□□□ 0.27
TRAM1L1Q8N609 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAM1L1Q8N609 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.72■□□□□ 0.27
TRAM1L1Q8N609 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAM1L1Q8N609 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.71■□□□□ 0.27
TRAM1L1Q8N609 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRAM1L1Q8N609 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAM1L1Q8N609 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.71■□□□□ 0.27
TRAM1L1Q8N609 AC005915.1-201ENST00000624912 2018 ntBASIC16.71■□□□□ 0.27
TRAM1L1Q8N609 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAM1L1Q8N609 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.71■□□□□ 0.27
TRAM1L1Q8N609 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAM1L1Q8N609 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAM1L1Q8N609 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.71■□□□□ 0.27
TRAM1L1Q8N609 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAM1L1Q8N609 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.71■□□□□ 0.27
TRAM1L1Q8N609 AC004832.2-201ENST00000426397 482 ntBASIC16.71■□□□□ 0.27
TRAM1L1Q8N609 AC074386.1-202ENST00000463561 864 ntBASIC16.71■□□□□ 0.27
TRAM1L1Q8N609 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.71■□□□□ 0.27
TRAM1L1Q8N609 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.71■□□□□ 0.27
TRAM1L1Q8N609 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.71■□□□□ 0.27
TRAM1L1Q8N609 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAM1L1Q8N609 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAM1L1Q8N609 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAM1L1Q8N609 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRAM1L1Q8N609 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAM1L1Q8N609 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAM1L1Q8N609 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRAM1L1Q8N609 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAM1L1Q8N609 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAM1L1Q8N609 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TRAM1L1Q8N609 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.71■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms