Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEFF1Q8IYR6 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEFF1Q8IYR6 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEFF1Q8IYR6 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TMEFF1Q8IYR6 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMEFF1Q8IYR6 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.8■□□□□ 0.28
TMEFF1Q8IYR6 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMEFF1Q8IYR6 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMEFF1Q8IYR6 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TMEFF1Q8IYR6 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TMEFF1Q8IYR6 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMEFF1Q8IYR6 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMEFF1Q8IYR6 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
TMEFF1Q8IYR6 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMEFF1Q8IYR6 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMEFF1Q8IYR6 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMEFF1Q8IYR6 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TMEFF1Q8IYR6 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMEFF1Q8IYR6 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.8■□□□□ 0.28
TMEFF1Q8IYR6 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.8■□□□□ 0.28
TMEFF1Q8IYR6 AC109635.5-201ENST00000533593 962 ntBASIC16.8■□□□□ 0.28
TMEFF1Q8IYR6 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.8■□□□□ 0.28
TMEFF1Q8IYR6 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMEFF1Q8IYR6 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.8■□□□□ 0.28
TMEFF1Q8IYR6 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.8■□□□□ 0.28
TMEFF1Q8IYR6 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC16.8■□□□□ 0.28
TMEFF1Q8IYR6 AC084121.4-201ENST00000641598 221 ntBASIC16.8■□□□□ 0.28
TMEFF1Q8IYR6 AF228730.8-201ENST00000642140 221 ntBASIC16.8■□□□□ 0.28
TMEFF1Q8IYR6 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMEFF1Q8IYR6 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TMEFF1Q8IYR6 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TMEFF1Q8IYR6 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMEFF1Q8IYR6 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TMEFF1Q8IYR6 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.8■□□□□ 0.28
TMEFF1Q8IYR6 LINC00304-203ENST00000565008 1864 ntBASIC16.8■□□□□ 0.28
TMEFF1Q8IYR6 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TMEFF1Q8IYR6 AL353732.1-201ENST00000569618 1459 ntBASIC16.8■□□□□ 0.28
TMEFF1Q8IYR6 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEFF1Q8IYR6 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.79■□□□□ 0.28
TMEFF1Q8IYR6 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEFF1Q8IYR6 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TMEFF1Q8IYR6 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TMEFF1Q8IYR6 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.79■□□□□ 0.28
TMEFF1Q8IYR6 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
TMEFF1Q8IYR6 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.79■□□□□ 0.28
TMEFF1Q8IYR6 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.79■□□□□ 0.28
TMEFF1Q8IYR6 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
TMEFF1Q8IYR6 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.79■□□□□ 0.28
TMEFF1Q8IYR6 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.79■□□□□ 0.28
TMEFF1Q8IYR6 AC027307.2-201ENST00000591252 911 ntBASIC16.79■□□□□ 0.28
TMEFF1Q8IYR6 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.79■□□□□ 0.28
TMEFF1Q8IYR6 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
TMEFF1Q8IYR6 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.79■□□□□ 0.28
TMEFF1Q8IYR6 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
TMEFF1Q8IYR6 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEFF1Q8IYR6 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TMEFF1Q8IYR6 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEFF1Q8IYR6 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.79■□□□□ 0.28
TMEFF1Q8IYR6 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TMEFF1Q8IYR6 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEFF1Q8IYR6 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
TMEFF1Q8IYR6 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEFF1Q8IYR6 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TMEFF1Q8IYR6 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.78■□□□□ 0.28
TMEFF1Q8IYR6 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEFF1Q8IYR6 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TMEFF1Q8IYR6 AC134043.2-201ENST00000624206 2238 ntBASIC16.78■□□□□ 0.28
TMEFF1Q8IYR6 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEFF1Q8IYR6 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TMEFF1Q8IYR6 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEFF1Q8IYR6 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEFF1Q8IYR6 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TMEFF1Q8IYR6 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEFF1Q8IYR6 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
TMEFF1Q8IYR6 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEFF1Q8IYR6 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEFF1Q8IYR6 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
TMEFF1Q8IYR6 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
TMEFF1Q8IYR6 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.78■□□□□ 0.28
TMEFF1Q8IYR6 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.78■□□□□ 0.28
TMEFF1Q8IYR6 GAPDHP21-201ENST00000450301 1010 ntBASIC16.78■□□□□ 0.28
TMEFF1Q8IYR6 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC16.78■□□□□ 0.28
TMEFF1Q8IYR6 AP005018.1-201ENST00000525475 301 ntBASIC16.78■□□□□ 0.28
TMEFF1Q8IYR6 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.78■□□□□ 0.28
TMEFF1Q8IYR6 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.78■□□□□ 0.28
TMEFF1Q8IYR6 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.78■□□□□ 0.28
TMEFF1Q8IYR6 MIR4453-201ENST00000584019 89 ntBASIC16.78■□□□□ 0.28
TMEFF1Q8IYR6 AC008267.7-201ENST00000624570 1194 ntBASIC16.78■□□□□ 0.28
TMEFF1Q8IYR6 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
TMEFF1Q8IYR6 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.78■□□□□ 0.28
TMEFF1Q8IYR6 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TMEFF1Q8IYR6 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEFF1Q8IYR6 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TMEFF1Q8IYR6 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.78■□□□□ 0.28
TMEFF1Q8IYR6 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TMEFF1Q8IYR6 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
TMEFF1Q8IYR6 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TMEFF1Q8IYR6 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.78■□□□□ 0.28
TMEFF1Q8IYR6 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
TMEFF1Q8IYR6 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms