Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SHROOM1Q2M3G4 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC19.67■□□□□ 0.74
SHROOM1Q2M3G4 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SHROOM1Q2M3G4 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SHROOM1Q2M3G4 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SHROOM1Q2M3G4 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SHROOM1Q2M3G4 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SHROOM1Q2M3G4 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC19.67■□□□□ 0.74
SHROOM1Q2M3G4 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC19.67■□□□□ 0.74
SHROOM1Q2M3G4 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
SHROOM1Q2M3G4 KLF2P3-201ENST00000451977 1087 ntBASIC19.67■□□□□ 0.74
SHROOM1Q2M3G4 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC19.67■□□□□ 0.74
SHROOM1Q2M3G4 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC19.67■□□□□ 0.74
SHROOM1Q2M3G4 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SHROOM1Q2M3G4 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC19.67■□□□□ 0.74
SHROOM1Q2M3G4 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC19.67■□□□□ 0.74
SHROOM1Q2M3G4 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC19.67■□□□□ 0.74
SHROOM1Q2M3G4 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SHROOM1Q2M3G4 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SHROOM1Q2M3G4 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SHROOM1Q2M3G4 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC19.67■□□□□ 0.74
SHROOM1Q2M3G4 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SHROOM1Q2M3G4 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SHROOM1Q2M3G4 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SHROOM1Q2M3G4 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SHROOM1Q2M3G4 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SHROOM1Q2M3G4 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC19.67■□□□□ 0.74
SHROOM1Q2M3G4 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SHROOM1Q2M3G4 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SHROOM1Q2M3G4 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SHROOM1Q2M3G4 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
SHROOM1Q2M3G4 SLC9A3P2-201ENST00000447821 2021 ntBASIC19.66■□□□□ 0.74
SHROOM1Q2M3G4 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SHROOM1Q2M3G4 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SHROOM1Q2M3G4 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SHROOM1Q2M3G4 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SHROOM1Q2M3G4 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SHROOM1Q2M3G4 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SHROOM1Q2M3G4 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SHROOM1Q2M3G4 KLK8-202ENST00000320838 456 ntTSL 5 BASIC19.66■□□□□ 0.74
SHROOM1Q2M3G4 MIR346-201ENST00000362234 95 ntBASIC19.66■□□□□ 0.74
SHROOM1Q2M3G4 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC19.66■□□□□ 0.74
SHROOM1Q2M3G4 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC19.66■□□□□ 0.74
SHROOM1Q2M3G4 AC125807.1-201ENST00000483097 614 ntBASIC19.66■□□□□ 0.74
SHROOM1Q2M3G4 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SHROOM1Q2M3G4 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC19.66■□□□□ 0.74
SHROOM1Q2M3G4 ALG1L8P-201ENST00000533887 760 ntBASIC19.66■□□□□ 0.74
SHROOM1Q2M3G4 AQP6-203ENST00000551733 849 ntTSL 3 BASIC19.66■□□□□ 0.74
SHROOM1Q2M3G4 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SHROOM1Q2M3G4 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC19.66■□□□□ 0.74
SHROOM1Q2M3G4 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SHROOM1Q2M3G4 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.66■□□□□ 0.74
SHROOM1Q2M3G4 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
SHROOM1Q2M3G4 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SHROOM1Q2M3G4 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SHROOM1Q2M3G4 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SHROOM1Q2M3G4 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SHROOM1Q2M3G4 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SHROOM1Q2M3G4 FOXO1B-201ENST00000504678 1527 ntBASIC19.66■□□□□ 0.74
SHROOM1Q2M3G4 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SHROOM1Q2M3G4 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SHROOM1Q2M3G4 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SHROOM1Q2M3G4 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
SHROOM1Q2M3G4 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.65■□□□□ 0.74
SHROOM1Q2M3G4 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SHROOM1Q2M3G4 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SHROOM1Q2M3G4 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
SHROOM1Q2M3G4 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SHROOM1Q2M3G4 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SHROOM1Q2M3G4 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
SHROOM1Q2M3G4 AC139713.2-201ENST00000641328 2723 ntBASIC19.65■□□□□ 0.74
SHROOM1Q2M3G4 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SHROOM1Q2M3G4 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SHROOM1Q2M3G4 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SHROOM1Q2M3G4 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC19.65■□□□□ 0.74
SHROOM1Q2M3G4 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
SHROOM1Q2M3G4 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC19.65■□□□□ 0.74
SHROOM1Q2M3G4 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC19.65■□□□□ 0.74
SHROOM1Q2M3G4 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC19.65■□□□□ 0.74
SHROOM1Q2M3G4 KRT8P23-201ENST00000560090 1207 ntBASIC19.65■□□□□ 0.74
SHROOM1Q2M3G4 AC138761.1-201ENST00000584393 385 ntBASIC19.65■□□□□ 0.74
SHROOM1Q2M3G4 AC008267.7-201ENST00000624570 1194 ntBASIC19.65■□□□□ 0.74
SHROOM1Q2M3G4 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.65■□□□□ 0.74
SHROOM1Q2M3G4 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SHROOM1Q2M3G4 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SHROOM1Q2M3G4 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SHROOM1Q2M3G4 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SHROOM1Q2M3G4 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC19.65■□□□□ 0.74
SHROOM1Q2M3G4 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SHROOM1Q2M3G4 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
SHROOM1Q2M3G4 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
SHROOM1Q2M3G4 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SHROOM1Q2M3G4 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SHROOM1Q2M3G4 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
SHROOM1Q2M3G4 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SHROOM1Q2M3G4 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SHROOM1Q2M3G4 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
SHROOM1Q2M3G4 PMS2P4-201ENST00000412466 1052 ntBASIC19.64■□□□□ 0.73
SHROOM1Q2M3G4 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC19.64■□□□□ 0.73
SHROOM1Q2M3G4 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms