Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.83■□□□□ 0.45
USP46P62068 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
USP46P62068 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
USP46P62068 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
USP46P62068 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
USP46P62068 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
USP46P62068 FAM58CP-201ENST00000435741 640 ntBASIC17.83■□□□□ 0.44
USP46P62068 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
USP46P62068 DNAJB3-202ENST00000449667 1266 ntBASIC17.83■□□□□ 0.44
USP46P62068 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.83■□□□□ 0.44
USP46P62068 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.83■□□□□ 0.44
USP46P62068 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.83■□□□□ 0.44
USP46P62068 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.83■□□□□ 0.44
USP46P62068 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
USP46P62068 DUX4L17-201ENST00000557360 1267 ntBASIC17.83■□□□□ 0.44
USP46P62068 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.83■□□□□ 0.44
USP46P62068 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.83■□□□□ 0.44
USP46P62068 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.83■□□□□ 0.44
USP46P62068 AC091812.2-201ENST00000619081 385 ntBASIC17.83■□□□□ 0.44
USP46P62068 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.83■□□□□ 0.44
USP46P62068 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
USP46P62068 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
USP46P62068 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
USP46P62068 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
USP46P62068 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
USP46P62068 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.83■□□□□ 0.44
USP46P62068 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
USP46P62068 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
USP46P62068 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
USP46P62068 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
USP46P62068 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
USP46P62068 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
USP46P62068 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
USP46P62068 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
USP46P62068 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.82■□□□□ 0.44
USP46P62068 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
USP46P62068 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
USP46P62068 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP46P62068 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP46P62068 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
USP46P62068 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP46P62068 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.82■□□□□ 0.44
USP46P62068 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
USP46P62068 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP46P62068 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP46P62068 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP46P62068 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
USP46P62068 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP46P62068 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
USP46P62068 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.82■□□□□ 0.44
USP46P62068 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
USP46P62068 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.82■□□□□ 0.44
USP46P62068 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
USP46P62068 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP46P62068 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP46P62068 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
USP46P62068 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP46P62068 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
USP46P62068 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.82■□□□□ 0.44
USP46P62068 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.82■□□□□ 0.44
USP46P62068 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.82■□□□□ 0.44
USP46P62068 MKNK2P1-201ENST00000437526 628 ntBASIC17.82■□□□□ 0.44
USP46P62068 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.82■□□□□ 0.44
USP46P62068 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.82■□□□□ 0.44
USP46P62068 AP002472.1-201ENST00000577490 586 ntBASIC17.82■□□□□ 0.44
USP46P62068 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.82■□□□□ 0.44
USP46P62068 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.82■□□□□ 0.44
USP46P62068 AC068137.2-201ENST00000605408 478 ntBASIC17.82■□□□□ 0.44
USP46P62068 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.82■□□□□ 0.44
USP46P62068 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP46P62068 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP46P62068 ELL2P1-201ENST00000413990 1906 ntBASIC17.82■□□□□ 0.44
USP46P62068 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP46P62068 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.82■□□□□ 0.44
USP46P62068 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP46P62068 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.82■□□□□ 0.44
USP46P62068 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
USP46P62068 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP46P62068 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP46P62068 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
USP46P62068 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.81■□□□□ 0.44
USP46P62068 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.81■□□□□ 0.44
USP46P62068 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
USP46P62068 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.81■□□□□ 0.44
USP46P62068 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP46P62068 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
USP46P62068 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP46P62068 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP46P62068 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.81■□□□□ 0.44
USP46P62068 CEND1P1-201ENST00000451006 455 ntBASIC17.81■□□□□ 0.44
USP46P62068 AC017007.3-201ENST00000479865 435 ntBASIC17.81■□□□□ 0.44
USP46P62068 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.81■□□□□ 0.44
USP46P62068 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
USP46P62068 AL596442.2-201ENST00000610240 980 ntBASIC17.81■□□□□ 0.44
USP46P62068 AC092902.6-201ENST00000641783 218 ntBASIC17.81■□□□□ 0.44
USP46P62068 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
USP46P62068 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP46P62068 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP46P62068 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
USP46P62068 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms