Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH13P55290 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.64■□□□□ 0.25
CDH13P55290 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CDH13P55290 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
CDH13P55290 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.64■□□□□ 0.25
CDH13P55290 NUS1P2-201ENST00000417358 873 ntBASIC16.64■□□□□ 0.25
CDH13P55290 ACTG1P4-201ENST00000425123 1122 ntBASIC16.64■□□□□ 0.25
CDH13P55290 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.64■□□□□ 0.25
CDH13P55290 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH13P55290 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.64■□□□□ 0.25
CDH13P55290 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.64■□□□□ 0.25
CDH13P55290 MIR5100-201ENST00000579544 119 ntBASIC16.64■□□□□ 0.25
CDH13P55290 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.64■□□□□ 0.25
CDH13P55290 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.64■□□□□ 0.25
CDH13P55290 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CDH13P55290 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.64■□□□□ 0.25
CDH13P55290 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH13P55290 HLA-A-202ENST00000376806 1854 ntBASIC16.64■□□□□ 0.25
CDH13P55290 AL391256.1-201ENST00000443260 1855 ntBASIC16.64■□□□□ 0.25
CDH13P55290 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH13P55290 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH13P55290 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH13P55290 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH13P55290 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CDH13P55290 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH13P55290 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH13P55290 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
CDH13P55290 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH13P55290 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH13P55290 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.64■□□□□ 0.25
CDH13P55290 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH13P55290 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDH13P55290 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.63■□□□□ 0.25
CDH13P55290 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDH13P55290 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH13P55290 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH13P55290 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDH13P55290 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH13P55290 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.63■□□□□ 0.25
CDH13P55290 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.63■□□□□ 0.25
CDH13P55290 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDH13P55290 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDH13P55290 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.63■□□□□ 0.25
CDH13P55290 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH13P55290 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH13P55290 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
CDH13P55290 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.63■□□□□ 0.25
CDH13P55290 ABCD1P5-201ENST00000445663 754 ntBASIC16.63■□□□□ 0.25
CDH13P55290 AC012615.1-201ENST00000565797 1299 ntBASIC16.63■□□□□ 0.25
CDH13P55290 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.63■□□□□ 0.25
CDH13P55290 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH13P55290 AC069148.1-201ENST00000608741 768 ntBASIC16.63■□□□□ 0.25
CDH13P55290 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDH13P55290 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.63■□□□□ 0.25
CDH13P55290 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH13P55290 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH13P55290 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDH13P55290 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH13P55290 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH13P55290 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.63■□□□□ 0.25
CDH13P55290 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CDH13P55290 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CDH13P55290 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH13P55290 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.63■□□□□ 0.25
CDH13P55290 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH13P55290 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
CDH13P55290 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.62■□□□□ 0.25
CDH13P55290 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.62■□□□□ 0.25
CDH13P55290 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH13P55290 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH13P55290 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH13P55290 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH13P55290 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH13P55290 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.62■□□□□ 0.25
CDH13P55290 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDH13P55290 LINC00982-205ENST00000420957 435 ntBASIC16.62■□□□□ 0.25
CDH13P55290 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.62■□□□□ 0.25
CDH13P55290 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH13P55290 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.62■□□□□ 0.25
CDH13P55290 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.62■□□□□ 0.25
CDH13P55290 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.62■□□□□ 0.25
CDH13P55290 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH13P55290 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH13P55290 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.62■□□□□ 0.25
CDH13P55290 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH13P55290 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
CDH13P55290 TUBB8P12-201ENST00000308911 1335 ntBASIC16.62■□□□□ 0.25
CDH13P55290 TUBB7P-202ENST00000428444 1305 ntBASIC16.62■□□□□ 0.25
CDH13P55290 TUBB8P7-204ENST00000567960 1332 ntBASIC16.62■□□□□ 0.25
CDH13P55290 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH13P55290 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDH13P55290 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH13P55290 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH13P55290 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH13P55290 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.62■□□□□ 0.25
CDH13P55290 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH13P55290 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH13P55290 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH13P55290 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH13P55290 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms