Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 SPDYE22P-201ENST00000582158 798 ntBASIC21.32■■□□□ 1
COL15A1P39059 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC21.32■■□□□ 1
COL15A1P39059 AP001350.2-201ENST00000625104 1094 ntBASIC21.32■■□□□ 1
COL15A1P39059 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC21.32■■□□□ 1
COL15A1P39059 LINC00895-201ENST00000629028 1637 ntBASIC21.32■■□□□ 1
COL15A1P39059 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
COL15A1P39059 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COL15A1P39059 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
COL15A1P39059 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COL15A1P39059 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL15A1P39059 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
COL15A1P39059 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL15A1P39059 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC21.31■■□□□ 1
COL15A1P39059 FOS-208ENST00000555686 1496 ntTSL 2 BASIC21.31■■□□□ 1
COL15A1P39059 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
COL15A1P39059 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
COL15A1P39059 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL15A1P39059 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC21.31■■□□□ 1
COL15A1P39059 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
COL15A1P39059 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL15A1P39059 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL15A1P39059 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
COL15A1P39059 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL15A1P39059 GK-202ENST00000378941 458 ntTSL 3 BASIC21.31■■□□□ 1
COL15A1P39059 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC21.31■■□□□ 1
COL15A1P39059 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL15A1P39059 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL15A1P39059 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC21.31■■□□□ 1
COL15A1P39059 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC21.31■■□□□ 1
COL15A1P39059 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC21.31■■□□□ 1
COL15A1P39059 RARRES2P9-201ENST00000565168 469 ntBASIC21.31■■□□□ 1
COL15A1P39059 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC21.31■■□□□ 1
COL15A1P39059 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC21.31■■□□□ 1
COL15A1P39059 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL15A1P39059 RHBDF1P1-201ENST00000427504 1941 ntBASIC21.31■■□□□ 1
COL15A1P39059 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL15A1P39059 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COL15A1P39059 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC21.3■■□□□ 1
COL15A1P39059 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COL15A1P39059 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COL15A1P39059 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
COL15A1P39059 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
COL15A1P39059 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
COL15A1P39059 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COL15A1P39059 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.3■■□□□ 1
COL15A1P39059 LINC02012-201ENST00000608206 1725 ntBASIC21.3■■□□□ 1
COL15A1P39059 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC21.3■■□□□ 1
COL15A1P39059 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC21.3■■□□□ 1
COL15A1P39059 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC21.3■■□□□ 1
COL15A1P39059 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC21.3■■□□□ 1
COL15A1P39059 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC21.3■■□□□ 1
COL15A1P39059 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC21.3■■□□□ 1
COL15A1P39059 AC105233.2-201ENST00000523697 349 ntBASIC21.3■■□□□ 1
COL15A1P39059 AF228730.5-201ENST00000530288 346 ntBASIC21.3■■□□□ 1
COL15A1P39059 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC21.3■■□□□ 1
COL15A1P39059 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
COL15A1P39059 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
COL15A1P39059 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC21.3■■□□□ 1
COL15A1P39059 PP12613-201ENST00000424958 2230 ntBASIC21.3■■□□□ 1
COL15A1P39059 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COL15A1P39059 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC21.3■■□□□ 1
COL15A1P39059 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
COL15A1P39059 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COL15A1P39059 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC21.29■■□□□ 1
COL15A1P39059 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
COL15A1P39059 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COL15A1P39059 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC21.29■■□□□ 1
COL15A1P39059 CDK2AP2P3-201ENST00000422476 372 ntBASIC21.29■■□□□ 1
COL15A1P39059 AC009118.2-201ENST00000613275 655 ntBASIC21.29■■□□□ 1
COL15A1P39059 AL590560.3-201ENST00000623350 461 ntBASIC21.29■■□□□ 1
COL15A1P39059 AC025048.6-201ENST00000634326 1161 ntBASIC21.29■■□□□ 1
COL15A1P39059 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
COL15A1P39059 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COL15A1P39059 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC21.29■■□□□ 1
COL15A1P39059 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC21.29■■□□□ 1
COL15A1P39059 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COL15A1P39059 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC21.29■■□□□ 1
COL15A1P39059 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC21.28■■□□□ 1
COL15A1P39059 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC21.28■■□□□ 1
COL15A1P39059 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC21.28■■□□□ 1
COL15A1P39059 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
COL15A1P39059 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC21.28■■□□□ 1
COL15A1P39059 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC21.28■■□□□ 1
COL15A1P39059 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
COL15A1P39059 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
COL15A1P39059 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC21.28■■□□□ 1
COL15A1P39059 AC027369.6-201ENST00000525520 931 ntBASIC21.28■■□□□ 1
COL15A1P39059 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC21.28■■□□□ 1
COL15A1P39059 CYP2A7P1-201ENST00000595391 815 ntBASIC21.28■■□□□ 1
COL15A1P39059 AC018529.1-201ENST00000613063 361 ntBASIC21.28■■□□□ 1
COL15A1P39059 AC007967.4-201ENST00000614700 386 ntBASIC21.28■■□□□ 1
COL15A1P39059 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
COL15A1P39059 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
COL15A1P39059 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC21.28■■□□□ 1
COL15A1P39059 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
COL15A1P39059 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
COL15A1P39059 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
COL15A1P39059 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC21.28■■□□□ 1
COL15A1P39059 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
COL15A1P39059 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms