Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NFKB1P19838 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NFKB1P19838 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.27■□□□□ 0.36
NFKB1P19838 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
NFKB1P19838 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.27■□□□□ 0.36
NFKB1P19838 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
NFKB1P19838 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
NFKB1P19838 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.27■□□□□ 0.36
NFKB1P19838 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.27■□□□□ 0.36
NFKB1P19838 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
NFKB1P19838 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NFKB1P19838 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.27■□□□□ 0.36
NFKB1P19838 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.27■□□□□ 0.36
NFKB1P19838 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NFKB1P19838 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.27■□□□□ 0.36
NFKB1P19838 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.27■□□□□ 0.36
NFKB1P19838 AC087163.2-201ENST00000457299 853 ntBASIC17.27■□□□□ 0.36
NFKB1P19838 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.27■□□□□ 0.36
NFKB1P19838 AF186996.4-201ENST00000467186 377 ntBASIC17.27■□□□□ 0.36
NFKB1P19838 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
NFKB1P19838 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.27■□□□□ 0.36
NFKB1P19838 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.27■□□□□ 0.36
NFKB1P19838 KRT126P-201ENST00000549467 1181 ntBASIC17.27■□□□□ 0.36
NFKB1P19838 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.27■□□□□ 0.36
NFKB1P19838 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.27■□□□□ 0.36
NFKB1P19838 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.27■□□□□ 0.36
NFKB1P19838 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
NFKB1P19838 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.27■□□□□ 0.36
NFKB1P19838 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.27■□□□□ 0.36
NFKB1P19838 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
NFKB1P19838 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NFKB1P19838 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NFKB1P19838 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NFKB1P19838 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.35
NFKB1P19838 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
NFKB1P19838 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
NFKB1P19838 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
NFKB1P19838 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
NFKB1P19838 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
NFKB1P19838 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NFKB1P19838 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
NFKB1P19838 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NFKB1P19838 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.27■□□□□ 0.35
NFKB1P19838 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NFKB1P19838 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NFKB1P19838 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NFKB1P19838 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
NFKB1P19838 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
NFKB1P19838 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NFKB1P19838 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.26■□□□□ 0.35
NFKB1P19838 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NFKB1P19838 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NFKB1P19838 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
NFKB1P19838 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
NFKB1P19838 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.26■□□□□ 0.35
NFKB1P19838 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.26■□□□□ 0.35
NFKB1P19838 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NFKB1P19838 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NFKB1P19838 RPS15P9-201ENST00000494093 319 ntBASIC17.26■□□□□ 0.35
NFKB1P19838 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NFKB1P19838 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.26■□□□□ 0.35
NFKB1P19838 AP002490.2-201ENST00000524791 560 ntBASIC17.26■□□□□ 0.35
NFKB1P19838 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.26■□□□□ 0.35
NFKB1P19838 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.26■□□□□ 0.35
NFKB1P19838 AC012640.2-201ENST00000561606 901 ntBASIC17.26■□□□□ 0.35
NFKB1P19838 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.26■□□□□ 0.35
NFKB1P19838 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NFKB1P19838 AC008735.5-201ENST00000623544 497 ntBASIC17.26■□□□□ 0.35
NFKB1P19838 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NFKB1P19838 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NFKB1P19838 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
NFKB1P19838 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NFKB1P19838 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.26■□□□□ 0.35
NFKB1P19838 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.26■□□□□ 0.35
NFKB1P19838 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.26■□□□□ 0.35
NFKB1P19838 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.25■□□□□ 0.35
NFKB1P19838 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.25■□□□□ 0.35
NFKB1P19838 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.25■□□□□ 0.35
NFKB1P19838 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NFKB1P19838 AP002414.3-201ENST00000589352 1468 ntBASIC17.25■□□□□ 0.35
NFKB1P19838 AL603756.1-201ENST00000606511 2163 ntBASIC17.25■□□□□ 0.35
NFKB1P19838 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NFKB1P19838 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.25■□□□□ 0.35
NFKB1P19838 AL391256.1-201ENST00000443260 1855 ntBASIC17.25■□□□□ 0.35
NFKB1P19838 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
NFKB1P19838 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
NFKB1P19838 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
NFKB1P19838 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.25■□□□□ 0.35
NFKB1P19838 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.25■□□□□ 0.35
NFKB1P19838 FAAHP1-202ENST00000446499 1238 ntBASIC17.25■□□□□ 0.35
NFKB1P19838 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.25■□□□□ 0.35
NFKB1P19838 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.25■□□□□ 0.35
NFKB1P19838 AC136632.2-201ENST00000512891 861 ntBASIC17.25■□□□□ 0.35
NFKB1P19838 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NFKB1P19838 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.25■□□□□ 0.35
NFKB1P19838 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.25■□□□□ 0.35
NFKB1P19838 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NFKB1P19838 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.25■□□□□ 0.35
NFKB1P19838 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.25■□□□□ 0.35
NFKB1P19838 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms