Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CSB-PGBD3P0DP91 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
CSB-PGBD3P0DP91 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CSB-PGBD3P0DP91 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC22.33■■□□□ 1.17
CSB-PGBD3P0DP91 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CSB-PGBD3P0DP91 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC22.33■■□□□ 1.17
CSB-PGBD3P0DP91 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.16
CSB-PGBD3P0DP91 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC22.33■■□□□ 1.16
CSB-PGBD3P0DP91 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
CSB-PGBD3P0DP91 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC22.33■■□□□ 1.16
CSB-PGBD3P0DP91 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
CSB-PGBD3P0DP91 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
CSB-PGBD3P0DP91 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CSB-PGBD3P0DP91 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CSB-PGBD3P0DP91 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
CSB-PGBD3P0DP91 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CSB-PGBD3P0DP91 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC22.32■■□□□ 1.16
CSB-PGBD3P0DP91 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC22.32■■□□□ 1.16
CSB-PGBD3P0DP91 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
CSB-PGBD3P0DP91 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CSB-PGBD3P0DP91 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC22.32■■□□□ 1.16
CSB-PGBD3P0DP91 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC22.32■■□□□ 1.16
CSB-PGBD3P0DP91 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC22.32■■□□□ 1.16
CSB-PGBD3P0DP91 MPI-209ENST00000564003 1195 ntTSL 2 BASIC22.32■■□□□ 1.16
CSB-PGBD3P0DP91 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC22.32■■□□□ 1.16
CSB-PGBD3P0DP91 AL359881.2-201ENST00000602973 570 ntBASIC22.32■■□□□ 1.16
CSB-PGBD3P0DP91 AC007967.4-201ENST00000614700 386 ntBASIC22.32■■□□□ 1.16
CSB-PGBD3P0DP91 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC22.32■■□□□ 1.16
CSB-PGBD3P0DP91 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CSB-PGBD3P0DP91 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
CSB-PGBD3P0DP91 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CSB-PGBD3P0DP91 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
CSB-PGBD3P0DP91 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CSB-PGBD3P0DP91 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CSB-PGBD3P0DP91 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC22.32■■□□□ 1.16
CSB-PGBD3P0DP91 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC22.32■■□□□ 1.16
CSB-PGBD3P0DP91 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
CSB-PGBD3P0DP91 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC22.32■■□□□ 1.16
CSB-PGBD3P0DP91 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CSB-PGBD3P0DP91 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
CSB-PGBD3P0DP91 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC22.31■■□□□ 1.16
CSB-PGBD3P0DP91 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC22.31■■□□□ 1.16
CSB-PGBD3P0DP91 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
CSB-PGBD3P0DP91 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CSB-PGBD3P0DP91 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CSB-PGBD3P0DP91 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CSB-PGBD3P0DP91 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CSB-PGBD3P0DP91 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CSB-PGBD3P0DP91 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CSB-PGBD3P0DP91 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC22.31■■□□□ 1.16
CSB-PGBD3P0DP91 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CSB-PGBD3P0DP91 STARD13-205ENST00000439831 945 ntTSL 2 BASIC22.31■■□□□ 1.16
CSB-PGBD3P0DP91 TMPRSS11CP-201ENST00000453277 683 ntBASIC22.31■■□□□ 1.16
CSB-PGBD3P0DP91 KRT18P34-201ENST00000488218 1270 ntBASIC22.31■■□□□ 1.16
CSB-PGBD3P0DP91 SATB1-217ENST00000493952 626 ntTSL 3 BASIC22.31■■□□□ 1.16
CSB-PGBD3P0DP91 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC22.31■■□□□ 1.16
CSB-PGBD3P0DP91 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC22.31■■□□□ 1.16
CSB-PGBD3P0DP91 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
CSB-PGBD3P0DP91 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC22.31■■□□□ 1.16
CSB-PGBD3P0DP91 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CSB-PGBD3P0DP91 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CSB-PGBD3P0DP91 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC22.31■■□□□ 1.16
CSB-PGBD3P0DP91 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC22.31■■□□□ 1.16
CSB-PGBD3P0DP91 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC22.31■■□□□ 1.16
CSB-PGBD3P0DP91 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC22.31■■□□□ 1.16
CSB-PGBD3P0DP91 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CSB-PGBD3P0DP91 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CSB-PGBD3P0DP91 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
CSB-PGBD3P0DP91 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
CSB-PGBD3P0DP91 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
CSB-PGBD3P0DP91 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
CSB-PGBD3P0DP91 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
CSB-PGBD3P0DP91 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC22.3■■□□□ 1.16
CSB-PGBD3P0DP91 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CSB-PGBD3P0DP91 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC22.3■■□□□ 1.16
CSB-PGBD3P0DP91 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
CSB-PGBD3P0DP91 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC22.3■■□□□ 1.16
CSB-PGBD3P0DP91 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CSB-PGBD3P0DP91 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CSB-PGBD3P0DP91 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
CSB-PGBD3P0DP91 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CSB-PGBD3P0DP91 SLC9A3P2-201ENST00000447821 2021 ntBASIC22.3■■□□□ 1.16
CSB-PGBD3P0DP91 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
CSB-PGBD3P0DP91 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC22.3■■□□□ 1.16
CSB-PGBD3P0DP91 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC22.3■■□□□ 1.16
CSB-PGBD3P0DP91 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CSB-PGBD3P0DP91 PP14571-201ENST00000404327 934 ntTSL 2 BASIC22.3■■□□□ 1.16
CSB-PGBD3P0DP91 SPTLC1P1-201ENST00000447199 261 ntBASIC22.3■■□□□ 1.16
CSB-PGBD3P0DP91 KRT17P7-201ENST00000451704 1104 ntBASIC22.3■■□□□ 1.16
CSB-PGBD3P0DP91 NAA50-208ENST00000497255 789 ntTSL 5 BASIC22.3■■□□□ 1.16
CSB-PGBD3P0DP91 LY6E-204ENST00000519546 971 ntTSL 2 BASIC22.3■■□□□ 1.16
CSB-PGBD3P0DP91 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC22.3■■□□□ 1.16
CSB-PGBD3P0DP91 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC22.3■■□□□ 1.16
CSB-PGBD3P0DP91 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
CSB-PGBD3P0DP91 CYP2A7P1-201ENST00000595391 815 ntBASIC22.3■■□□□ 1.16
CSB-PGBD3P0DP91 AC021097.1-201ENST00000607902 574 ntBASIC22.3■■□□□ 1.16
CSB-PGBD3P0DP91 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
CSB-PGBD3P0DP91 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CSB-PGBD3P0DP91 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
CSB-PGBD3P0DP91 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms