Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 CYP2A7P1-201ENST00000595391 815 ntBASIC17.81■□□□□ 0.44
RB1P06400 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RB1P06400 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC17.81■□□□□ 0.44
RB1P06400 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC17.81■□□□□ 0.44
RB1P06400 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
RB1P06400 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
RB1P06400 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RB1P06400 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RB1P06400 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.81■□□□□ 0.44
RB1P06400 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
RB1P06400 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
RB1P06400 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
RB1P06400 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
RB1P06400 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.81■□□□□ 0.44
RB1P06400 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RB1P06400 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RB1P06400 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RB1P06400 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RB1P06400 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RB1P06400 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
RB1P06400 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
RB1P06400 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RB1P06400 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
RB1P06400 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RB1P06400 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RB1P06400 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RB1P06400 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
RB1P06400 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
RB1P06400 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RB1P06400 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC17.8■□□□□ 0.44
RB1P06400 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RB1P06400 U91328.1-201ENST00000437528 223 ntBASIC17.8■□□□□ 0.44
RB1P06400 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
RB1P06400 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC17.8■□□□□ 0.44
RB1P06400 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RB1P06400 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
RB1P06400 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RB1P06400 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RB1P06400 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RB1P06400 AC007541.1-201ENST00000570282 1469 ntBASIC17.8■□□□□ 0.44
RB1P06400 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RB1P06400 CETN4P-206ENST00000642099 2168 ntBASIC17.8■□□□□ 0.44
RB1P06400 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
RB1P06400 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RB1P06400 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
RB1P06400 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
RB1P06400 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RB1P06400 LINC00895-201ENST00000629028 1637 ntBASIC17.8■□□□□ 0.44
RB1P06400 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
RB1P06400 AL021920.2-201ENST00000624828 1351 ntBASIC17.79■□□□□ 0.44
RB1P06400 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.79■□□□□ 0.44
RB1P06400 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
RB1P06400 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.79■□□□□ 0.44
RB1P06400 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RB1P06400 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
RB1P06400 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.79■□□□□ 0.44
RB1P06400 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
RB1P06400 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RB1P06400 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RB1P06400 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RB1P06400 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RB1P06400 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.79■□□□□ 0.44
RB1P06400 TMPRSS11CP-201ENST00000453277 683 ntBASIC17.79■□□□□ 0.44
RB1P06400 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
RB1P06400 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.79■□□□□ 0.44
RB1P06400 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.79■□□□□ 0.44
RB1P06400 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.79■□□□□ 0.44
RB1P06400 AC140912.1-201ENST00000577171 1054 ntBASIC17.79■□□□□ 0.44
RB1P06400 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.79■□□□□ 0.44
RB1P06400 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC17.79■□□□□ 0.44
RB1P06400 TEX28P1-201ENST00000613479 1221 ntBASIC17.79■□□□□ 0.44
RB1P06400 TEX28P2-201ENST00000617764 1221 ntBASIC17.79■□□□□ 0.44
RB1P06400 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
RB1P06400 AC133963.1-201ENST00000504166 1679 ntBASIC17.79■□□□□ 0.44
RB1P06400 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.79■□□□□ 0.44
RB1P06400 KRT8P49-201ENST00000604166 1432 ntBASIC17.79■□□□□ 0.44
RB1P06400 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.79■□□□□ 0.44
RB1P06400 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.79■□□□□ 0.44
RB1P06400 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC17.79■□□□□ 0.44
RB1P06400 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
RB1P06400 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.78■□□□□ 0.44
RB1P06400 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RB1P06400 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RB1P06400 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
RB1P06400 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.78■□□□□ 0.44
RB1P06400 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.78■□□□□ 0.44
RB1P06400 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.78■□□□□ 0.44
RB1P06400 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
RB1P06400 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RB1P06400 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RB1P06400 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.78■□□□□ 0.44
RB1P06400 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
RB1P06400 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.78■□□□□ 0.44
RB1P06400 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
RB1P06400 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RB1P06400 AC009113.1-201ENST00000570267 2443 ntBASIC17.78■□□□□ 0.44
RB1P06400 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.78■□□□□ 0.44
RB1P06400 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RB1P06400 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RB1P06400 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms