Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC16.92■□□□□ 0.3
CAPNS1P04632 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CAPNS1P04632 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CAPNS1P04632 LINC00304-203ENST00000565008 1864 ntBASIC16.92■□□□□ 0.3
CAPNS1P04632 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CAPNS1P04632 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CAPNS1P04632 GPR89P-201ENST00000407924 1495 ntBASIC16.92■□□□□ 0.3
CAPNS1P04632 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CAPNS1P04632 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CAPNS1P04632 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.92■□□□□ 0.3
CAPNS1P04632 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CAPNS1P04632 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CAPNS1P04632 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CAPNS1P04632 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CAPNS1P04632 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CAPNS1P04632 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CAPNS1P04632 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CAPNS1P04632 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CAPNS1P04632 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CAPNS1P04632 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.91■□□□□ 0.3
CAPNS1P04632 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.91■□□□□ 0.3
CAPNS1P04632 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CAPNS1P04632 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.91■□□□□ 0.3
CAPNS1P04632 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.91■□□□□ 0.3
CAPNS1P04632 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.91■□□□□ 0.3
CAPNS1P04632 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CAPNS1P04632 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CAPNS1P04632 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CAPNS1P04632 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.91■□□□□ 0.3
CAPNS1P04632 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.91■□□□□ 0.3
CAPNS1P04632 CRYGEP-201ENST00000412192 528 ntBASIC16.91■□□□□ 0.3
CAPNS1P04632 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.91■□□□□ 0.3
CAPNS1P04632 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CAPNS1P04632 BX005266.1-201ENST00000473402 457 ntBASIC16.91■□□□□ 0.3
CAPNS1P04632 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.91■□□□□ 0.3
CAPNS1P04632 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.91■□□□□ 0.3
CAPNS1P04632 AC018845.2-201ENST00000568326 409 ntBASIC16.91■□□□□ 0.3
CAPNS1P04632 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CAPNS1P04632 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.91■□□□□ 0.3
CAPNS1P04632 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.91■□□□□ 0.3
CAPNS1P04632 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.91■□□□□ 0.3
CAPNS1P04632 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CAPNS1P04632 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CAPNS1P04632 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.91■□□□□ 0.3
CAPNS1P04632 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CAPNS1P04632 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CAPNS1P04632 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CAPNS1P04632 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.91■□□□□ 0.3
CAPNS1P04632 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CAPNS1P04632 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.91■□□□□ 0.3
CAPNS1P04632 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.91■□□□□ 0.3
CAPNS1P04632 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.91■□□□□ 0.3
CAPNS1P04632 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.91■□□□□ 0.3
CAPNS1P04632 MST1L-201ENST00000442552 2185 ntBASIC16.91■□□□□ 0.3
CAPNS1P04632 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.91■□□□□ 0.3
CAPNS1P04632 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CAPNS1P04632 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CAPNS1P04632 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
CAPNS1P04632 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CAPNS1P04632 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.9■□□□□ 0.3
CAPNS1P04632 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CAPNS1P04632 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
CAPNS1P04632 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CAPNS1P04632 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.9■□□□□ 0.3
CAPNS1P04632 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
CAPNS1P04632 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CAPNS1P04632 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.9■□□□□ 0.3
CAPNS1P04632 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.9■□□□□ 0.3
CAPNS1P04632 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CAPNS1P04632 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CAPNS1P04632 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CAPNS1P04632 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.9■□□□□ 0.3
CAPNS1P04632 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CAPNS1P04632 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.9■□□□□ 0.3
CAPNS1P04632 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CAPNS1P04632 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.9■□□□□ 0.3
CAPNS1P04632 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
CAPNS1P04632 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.9■□□□□ 0.3
CAPNS1P04632 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.9■□□□□ 0.3
CAPNS1P04632 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CAPNS1P04632 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.9■□□□□ 0.3
CAPNS1P04632 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.9■□□□□ 0.3
CAPNS1P04632 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.9■□□□□ 0.3
CAPNS1P04632 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.9■□□□□ 0.3
CAPNS1P04632 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.9■□□□□ 0.3
CAPNS1P04632 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CAPNS1P04632 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.9■□□□□ 0.3
CAPNS1P04632 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CAPNS1P04632 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CAPNS1P04632 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CAPNS1P04632 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
CAPNS1P04632 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CAPNS1P04632 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CAPNS1P04632 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.89■□□□□ 0.29
CAPNS1P04632 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CAPNS1P04632 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CAPNS1P04632 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CAPNS1P04632 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CAPNS1P04632 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CAPNS1P04632 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms