Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
ZIC3O60481 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ZIC3O60481 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ZIC3O60481 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
ZIC3O60481 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
ZIC3O60481 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ZIC3O60481 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZIC3O60481 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ZIC3O60481 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
ZIC3O60481 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.22■□□□□ 0.03
ZIC3O60481 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ZIC3O60481 AC140658.5-201ENST00000438532 169 ntBASIC15.22■□□□□ 0.03
ZIC3O60481 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.22■□□□□ 0.03
ZIC3O60481 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.22■□□□□ 0.03
ZIC3O60481 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.22■□□□□ 0.03
ZIC3O60481 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.22■□□□□ 0.03
ZIC3O60481 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.22■□□□□ 0.03
ZIC3O60481 AC005829.1-201ENST00000570002 483 ntBASIC15.22■□□□□ 0.03
ZIC3O60481 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.22■□□□□ 0.03
ZIC3O60481 AC068137.2-201ENST00000605408 478 ntBASIC15.22■□□□□ 0.03
ZIC3O60481 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.22■□□□□ 0.03
ZIC3O60481 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.22■□□□□ 0.03
ZIC3O60481 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZIC3O60481 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZIC3O60481 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ZIC3O60481 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZIC3O60481 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZIC3O60481 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
ZIC3O60481 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ZIC3O60481 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.22■□□□□ 0.03
ZIC3O60481 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.22■□□□□ 0.03
ZIC3O60481 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC15.22■□□□□ 0.03
ZIC3O60481 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.22■□□□□ 0.03
ZIC3O60481 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZIC3O60481 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZIC3O60481 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.21■□□□□ 0.03
ZIC3O60481 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.21■□□□□ 0.03
ZIC3O60481 AC006277.1-201ENST00000624348 1610 ntBASIC15.21■□□□□ 0.03
ZIC3O60481 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZIC3O60481 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZIC3O60481 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZIC3O60481 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZIC3O60481 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
ZIC3O60481 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZIC3O60481 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZIC3O60481 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
ZIC3O60481 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
ZIC3O60481 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ZIC3O60481 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZIC3O60481 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.21■□□□□ 0.03
ZIC3O60481 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.21■□□□□ 0.03
ZIC3O60481 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.21■□□□□ 0.03
ZIC3O60481 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.21■□□□□ 0.03
ZIC3O60481 HTR5BP-201ENST00000430851 1154 ntBASIC15.21■□□□□ 0.03
ZIC3O60481 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.21■□□□□ 0.03
ZIC3O60481 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ZIC3O60481 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ZIC3O60481 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.21■□□□□ 0.03
ZIC3O60481 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.21■□□□□ 0.03
ZIC3O60481 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
ZIC3O60481 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.21■□□□□ 0.03
ZIC3O60481 CYP2A7P1-201ENST00000595391 815 ntBASIC15.21■□□□□ 0.03
ZIC3O60481 AC013467.2-201ENST00000605472 835 ntBASIC15.21■□□□□ 0.03
ZIC3O60481 AC055717.3-201ENST00000622967 595 ntBASIC15.21■□□□□ 0.03
ZIC3O60481 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZIC3O60481 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZIC3O60481 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ZIC3O60481 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ZIC3O60481 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZIC3O60481 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ZIC3O60481 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZIC3O60481 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZIC3O60481 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.21■□□□□ 0.03
ZIC3O60481 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
ZIC3O60481 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
ZIC3O60481 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
ZIC3O60481 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
ZIC3O60481 LINC00895-201ENST00000629028 1637 ntBASIC15.21■□□□□ 0.02
ZIC3O60481 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
ZIC3O60481 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZIC3O60481 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ZIC3O60481 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
ZIC3O60481 AL645728.1-201ENST00000366221 2101 ntBASIC15.2■□□□□ 0.02
ZIC3O60481 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZIC3O60481 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ZIC3O60481 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZIC3O60481 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ZIC3O60481 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZIC3O60481 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZIC3O60481 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ZIC3O60481 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
ZIC3O60481 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ZIC3O60481 AC080080.1-201ENST00000625121 2420 ntBASIC15.2■□□□□ 0.02
ZIC3O60481 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZIC3O60481 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZIC3O60481 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZIC3O60481 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZIC3O60481 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ZIC3O60481 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
ZIC3O60481 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms