Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
IDH3BO43837 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
IDH3BO43837 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
IDH3BO43837 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC15.67■□□□□ 0.1
IDH3BO43837 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.67■□□□□ 0.1
IDH3BO43837 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC15.67■□□□□ 0.1
IDH3BO43837 LINC01238-205ENST00000567549 1107 ntBASIC15.67■□□□□ 0.1
IDH3BO43837 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC15.67■□□□□ 0.1
IDH3BO43837 AC019129.2-201ENST00000609837 1235 ntBASIC15.67■□□□□ 0.1
IDH3BO43837 AC006011.2-201ENST00000621313 1158 ntBASIC15.67■□□□□ 0.1
IDH3BO43837 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
IDH3BO43837 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
IDH3BO43837 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.67■□□□□ 0.1
IDH3BO43837 AC099063.4-201ENST00000641099 1602 ntBASIC15.67■□□□□ 0.1
IDH3BO43837 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
IDH3BO43837 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
IDH3BO43837 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.67■□□□□ 0.1
IDH3BO43837 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
IDH3BO43837 AC125634.1-201ENST00000438758 1403 ntBASIC15.67■□□□□ 0.1
IDH3BO43837 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
IDH3BO43837 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
IDH3BO43837 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
IDH3BO43837 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.67■□□□□ 0.1
IDH3BO43837 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
IDH3BO43837 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
IDH3BO43837 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
IDH3BO43837 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.67■□□□□ 0.1
IDH3BO43837 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
IDH3BO43837 AL603756.1-201ENST00000606511 2163 ntBASIC15.66■□□□□ 0.1
IDH3BO43837 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
IDH3BO43837 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
IDH3BO43837 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.66■□□□□ 0.1
IDH3BO43837 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
IDH3BO43837 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
IDH3BO43837 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.66■□□□□ 0.1
IDH3BO43837 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
IDH3BO43837 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
IDH3BO43837 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
IDH3BO43837 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
IDH3BO43837 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
IDH3BO43837 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
IDH3BO43837 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
IDH3BO43837 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
IDH3BO43837 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
IDH3BO43837 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
IDH3BO43837 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
IDH3BO43837 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
IDH3BO43837 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.66■□□□□ 0.1
IDH3BO43837 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
IDH3BO43837 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
IDH3BO43837 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
IDH3BO43837 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
IDH3BO43837 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC15.66■□□□□ 0.1
IDH3BO43837 KRT18P57-201ENST00000443599 1254 ntBASIC15.66■□□□□ 0.1
IDH3BO43837 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.66■□□□□ 0.1
IDH3BO43837 RN7SL606P-201ENST00000472779 293 ntBASIC15.66■□□□□ 0.1
IDH3BO43837 AC063952.2-201ENST00000498792 1227 ntBASIC15.66■□□□□ 0.1
IDH3BO43837 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC15.66■□□□□ 0.1
IDH3BO43837 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC15.66■□□□□ 0.1
IDH3BO43837 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC15.66■□□□□ 0.1
IDH3BO43837 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
IDH3BO43837 AC111152.3-201ENST00000569699 673 ntBASIC15.66■□□□□ 0.1
IDH3BO43837 AC109462.3-201ENST00000573934 613 ntBASIC15.66■□□□□ 0.1
IDH3BO43837 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC15.66■□□□□ 0.1
IDH3BO43837 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.66■□□□□ 0.1
IDH3BO43837 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
IDH3BO43837 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
IDH3BO43837 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.66■□□□□ 0.1
IDH3BO43837 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
IDH3BO43837 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
IDH3BO43837 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
IDH3BO43837 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
IDH3BO43837 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.66■□□□□ 0.1
IDH3BO43837 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
IDH3BO43837 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
IDH3BO43837 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
IDH3BO43837 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
IDH3BO43837 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
IDH3BO43837 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
IDH3BO43837 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
IDH3BO43837 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.66■□□□□ 0.1
IDH3BO43837 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.66■□□□□ 0.1
IDH3BO43837 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.66■□□□□ 0.1
IDH3BO43837 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
IDH3BO43837 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
IDH3BO43837 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
IDH3BO43837 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
IDH3BO43837 UBC-206ENST00000538617 1303 ntTSL 5 BASIC15.66■□□□□ 0.1
IDH3BO43837 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
IDH3BO43837 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.66■□□□□ 0.1
IDH3BO43837 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
IDH3BO43837 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
IDH3BO43837 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
IDH3BO43837 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
IDH3BO43837 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
IDH3BO43837 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.65■□□□□ 0.1
IDH3BO43837 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
IDH3BO43837 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
IDH3BO43837 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
IDH3BO43837 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms