Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAF3IP2O43734 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAF3IP2O43734 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAF3IP2O43734 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAF3IP2O43734 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAF3IP2O43734 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAF3IP2O43734 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAF3IP2O43734 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.14■□□□□ 0.01
TRAF3IP2O43734 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAF3IP2O43734 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAF3IP2O43734 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAF3IP2O43734 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAF3IP2O43734 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAF3IP2O43734 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAF3IP2O43734 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
TRAF3IP2O43734 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAF3IP2O43734 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.13■□□□□ 0.01
TRAF3IP2O43734 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TRAF3IP2O43734 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAF3IP2O43734 AC002310.6-201ENST00000624451 1377 ntBASIC15.13■□□□□ 0.01
TRAF3IP2O43734 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAF3IP2O43734 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.13■□□□□ 0.01
TRAF3IP2O43734 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TRAF3IP2O43734 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAF3IP2O43734 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAF3IP2O43734 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAF3IP2O43734 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAF3IP2O43734 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAF3IP2O43734 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.13■□□□□ 0.01
TRAF3IP2O43734 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAF3IP2O43734 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.13■□□□□ 0.01
TRAF3IP2O43734 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAF3IP2O43734 AC009078.2-202ENST00000463353 338 ntBASIC15.13■□□□□ 0.01
TRAF3IP2O43734 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAF3IP2O43734 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAF3IP2O43734 IGHV3-65-201ENST00000523210 341 ntBASIC15.13■□□□□ 0.01
TRAF3IP2O43734 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAF3IP2O43734 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TRAF3IP2O43734 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC15.13■□□□□ 0.01
TRAF3IP2O43734 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.13■□□□□ 0.01
TRAF3IP2O43734 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.13■□□□□ 0.01
TRAF3IP2O43734 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAF3IP2O43734 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TRAF3IP2O43734 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRAF3IP2O43734 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAF3IP2O43734 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TRAF3IP2O43734 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRAF3IP2O43734 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRAF3IP2O43734 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAF3IP2O43734 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAF3IP2O43734 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAF3IP2O43734 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAF3IP2O43734 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.12■□□□□ 0.01
TRAF3IP2O43734 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAF3IP2O43734 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAF3IP2O43734 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
TRAF3IP2O43734 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAF3IP2O43734 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.12■□□□□ 0.01
TRAF3IP2O43734 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAF3IP2O43734 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
TRAF3IP2O43734 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
TRAF3IP2O43734 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAF3IP2O43734 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.12■□□□□ 0.01
TRAF3IP2O43734 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAF3IP2O43734 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAF3IP2O43734 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAF3IP2O43734 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAF3IP2O43734 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAF3IP2O43734 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
TRAF3IP2O43734 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAF3IP2O43734 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.12■□□□□ 0.01
TRAF3IP2O43734 SLC25A6P2-201ENST00000497974 877 ntBASIC15.12■□□□□ 0.01
TRAF3IP2O43734 AP002490.2-201ENST00000524791 560 ntBASIC15.12■□□□□ 0.01
TRAF3IP2O43734 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.12■□□□□ 0.01
TRAF3IP2O43734 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.12■□□□□ 0.01
TRAF3IP2O43734 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.12■□□□□ 0.01
TRAF3IP2O43734 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.12■□□□□ 0.01
TRAF3IP2O43734 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.12■□□□□ 0.01
TRAF3IP2O43734 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
TRAF3IP2O43734 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAF3IP2O43734 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAF3IP2O43734 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.12■□□□□ 0.01
TRAF3IP2O43734 AC117500.6-201ENST00000624871 588 ntBASIC15.12■□□□□ 0.01
TRAF3IP2O43734 PGM5P2-202ENST00000637225 1043 ntBASIC15.12■□□□□ 0.01
TRAF3IP2O43734 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAF3IP2O43734 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAF3IP2O43734 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAF3IP2O43734 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
TRAF3IP2O43734 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAF3IP2O43734 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.12■□□□□ 0.01
TRAF3IP2O43734 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAF3IP2O43734 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAF3IP2O43734 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAF3IP2O43734 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.12■□□□□ 0.01
TRAF3IP2O43734 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAF3IP2O43734 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAF3IP2O43734 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC15.12■□□□□ 0.01
TRAF3IP2O43734 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAF3IP2O43734 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.12■□□□□ 0.01
TRAF3IP2O43734 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms