Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAPPC1Q9Y5R8 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC12.91□□□□□ -0.34
TRAPPC1Q9Y5R8 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC12.91□□□□□ -0.34
TRAPPC1Q9Y5R8 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC12.91□□□□□ -0.34
TRAPPC1Q9Y5R8 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
TRAPPC1Q9Y5R8 MED29-202ENST00000594368 1471 ntTSL 2 BASIC12.91□□□□□ -0.34
TRAPPC1Q9Y5R8 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAPPC1Q9Y5R8 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC12.9□□□□□ -0.34
TRAPPC1Q9Y5R8 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAPPC1Q9Y5R8 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
TRAPPC1Q9Y5R8 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC12.9□□□□□ -0.34
TRAPPC1Q9Y5R8 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAPPC1Q9Y5R8 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAPPC1Q9Y5R8 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
TRAPPC1Q9Y5R8 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
TRAPPC1Q9Y5R8 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC12.9□□□□□ -0.34
TRAPPC1Q9Y5R8 BANP-203ENST00000393207 2438 ntTSL 2 BASIC12.9□□□□□ -0.34
TRAPPC1Q9Y5R8 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TRAPPC1Q9Y5R8 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC12.9□□□□□ -0.34
TRAPPC1Q9Y5R8 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAPPC1Q9Y5R8 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAPPC1Q9Y5R8 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
TRAPPC1Q9Y5R8 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
TRAPPC1Q9Y5R8 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAPPC1Q9Y5R8 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TRAPPC1Q9Y5R8 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TRAPPC1Q9Y5R8 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC12.9□□□□□ -0.34
TRAPPC1Q9Y5R8 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAPPC1Q9Y5R8 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAPPC1Q9Y5R8 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TRAPPC1Q9Y5R8 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
TRAPPC1Q9Y5R8 JTB-203ENST00000368589 1216 ntTSL 2 BASIC12.9□□□□□ -0.34
TRAPPC1Q9Y5R8 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC12.9□□□□□ -0.34
TRAPPC1Q9Y5R8 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC12.9□□□□□ -0.34
TRAPPC1Q9Y5R8 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC12.9□□□□□ -0.34
TRAPPC1Q9Y5R8 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC12.9□□□□□ -0.34
TRAPPC1Q9Y5R8 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC12.9□□□□□ -0.34
TRAPPC1Q9Y5R8 AL139327.4-201ENST00000612362 153 ntBASIC12.9□□□□□ -0.34
TRAPPC1Q9Y5R8 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAPPC1Q9Y5R8 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAPPC1Q9Y5R8 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TRAPPC1Q9Y5R8 ME2P1-201ENST00000426028 1970 ntBASIC12.9□□□□□ -0.34
TRAPPC1Q9Y5R8 AL359258.3-201ENST00000622910 2331 ntBASIC12.9□□□□□ -0.34
TRAPPC1Q9Y5R8 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC12.9□□□□□ -0.34
TRAPPC1Q9Y5R8 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAPPC1Q9Y5R8 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
TRAPPC1Q9Y5R8 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TRAPPC1Q9Y5R8 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TRAPPC1Q9Y5R8 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC12.9□□□□□ -0.34
TRAPPC1Q9Y5R8 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAPPC1Q9Y5R8 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
TRAPPC1Q9Y5R8 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC12.9□□□□□ -0.35
TRAPPC1Q9Y5R8 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
TRAPPC1Q9Y5R8 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAPPC1Q9Y5R8 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAPPC1Q9Y5R8 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAPPC1Q9Y5R8 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRAPPC1Q9Y5R8 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC12.89□□□□□ -0.35
TRAPPC1Q9Y5R8 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
TRAPPC1Q9Y5R8 R3HDM2P2-201ENST00000401880 2116 ntBASIC12.89□□□□□ -0.35
TRAPPC1Q9Y5R8 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
TRAPPC1Q9Y5R8 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRAPPC1Q9Y5R8 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
TRAPPC1Q9Y5R8 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAPPC1Q9Y5R8 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAPPC1Q9Y5R8 AL596087.1-201ENST00000400979 1969 ntBASIC12.89□□□□□ -0.35
TRAPPC1Q9Y5R8 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
TRAPPC1Q9Y5R8 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
TRAPPC1Q9Y5R8 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAPPC1Q9Y5R8 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAPPC1Q9Y5R8 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
TRAPPC1Q9Y5R8 STX7-201ENST00000367937 1090 ntTSL 5 BASIC12.89□□□□□ -0.35
TRAPPC1Q9Y5R8 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC12.89□□□□□ -0.35
TRAPPC1Q9Y5R8 REXO2-208ENST00000539754 791 ntTSL 2 BASIC12.89□□□□□ -0.35
TRAPPC1Q9Y5R8 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC12.89□□□□□ -0.35
TRAPPC1Q9Y5R8 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC12.89□□□□□ -0.35
TRAPPC1Q9Y5R8 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC12.89□□□□□ -0.35
TRAPPC1Q9Y5R8 PARP1-210ENST00000629232 477 ntTSL 5 BASIC12.89□□□□□ -0.35
TRAPPC1Q9Y5R8 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC12.89□□□□□ -0.35
TRAPPC1Q9Y5R8 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC12.89□□□□□ -0.35
TRAPPC1Q9Y5R8 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAPPC1Q9Y5R8 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRAPPC1Q9Y5R8 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRAPPC1Q9Y5R8 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
TRAPPC1Q9Y5R8 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC12.89□□□□□ -0.35
TRAPPC1Q9Y5R8 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAPPC1Q9Y5R8 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
TRAPPC1Q9Y5R8 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAPPC1Q9Y5R8 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAPPC1Q9Y5R8 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC12.89□□□□□ -0.35
TRAPPC1Q9Y5R8 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAPPC1Q9Y5R8 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAPPC1Q9Y5R8 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
TRAPPC1Q9Y5R8 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
TRAPPC1Q9Y5R8 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC12.88□□□□□ -0.35
TRAPPC1Q9Y5R8 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC12.88□□□□□ -0.35
TRAPPC1Q9Y5R8 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
TRAPPC1Q9Y5R8 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAPPC1Q9Y5R8 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC12.88□□□□□ -0.35
TRAPPC1Q9Y5R8 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms