Protein–RNA interactions for Protein: Q9UIS9

MBD1, Methyl-CpG-binding domain protein 1, humanhuman

Predicted RBP Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1Q9UIS9 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MBD1Q9UIS9 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MBD1Q9UIS9 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
MBD1Q9UIS9 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
MBD1Q9UIS9 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MBD1Q9UIS9 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.04■□□□□ 0.32
MBD1Q9UIS9 AC069335.1-201ENST00000489972 472 ntBASIC17.04■□□□□ 0.32
MBD1Q9UIS9 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MBD1Q9UIS9 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.04■□□□□ 0.32
MBD1Q9UIS9 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.04■□□□□ 0.32
MBD1Q9UIS9 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.04■□□□□ 0.32
MBD1Q9UIS9 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.04■□□□□ 0.32
MBD1Q9UIS9 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MBD1Q9UIS9 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MBD1Q9UIS9 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.04■□□□□ 0.32
MBD1Q9UIS9 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
MBD1Q9UIS9 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MBD1Q9UIS9 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MBD1Q9UIS9 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.04■□□□□ 0.32
MBD1Q9UIS9 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MBD1Q9UIS9 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MBD1Q9UIS9 AC093525.9-201ENST00000624961 1746 ntBASIC17.04■□□□□ 0.32
MBD1Q9UIS9 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MBD1Q9UIS9 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
MBD1Q9UIS9 AC016396.2-201ENST00000562575 1417 ntBASIC17.04■□□□□ 0.32
MBD1Q9UIS9 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MBD1Q9UIS9 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.04■□□□□ 0.32
MBD1Q9UIS9 AC092053.1-201ENST00000605787 1936 ntBASIC17.04■□□□□ 0.32
MBD1Q9UIS9 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MBD1Q9UIS9 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.03■□□□□ 0.32
MBD1Q9UIS9 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
MBD1Q9UIS9 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MBD1Q9UIS9 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.03■□□□□ 0.32
MBD1Q9UIS9 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.03■□□□□ 0.32
MBD1Q9UIS9 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
MBD1Q9UIS9 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MBD1Q9UIS9 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.03■□□□□ 0.32
MBD1Q9UIS9 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
MBD1Q9UIS9 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MBD1Q9UIS9 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MBD1Q9UIS9 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.03■□□□□ 0.32
MBD1Q9UIS9 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MBD1Q9UIS9 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MBD1Q9UIS9 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.03■□□□□ 0.32
MBD1Q9UIS9 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MBD1Q9UIS9 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MBD1Q9UIS9 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MBD1Q9UIS9 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.03■□□□□ 0.32
MBD1Q9UIS9 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.03■□□□□ 0.32
MBD1Q9UIS9 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.03■□□□□ 0.32
MBD1Q9UIS9 GPS2P2-201ENST00000430745 888 ntBASIC17.03■□□□□ 0.32
MBD1Q9UIS9 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.03■□□□□ 0.32
MBD1Q9UIS9 TAF8-206ENST00000472818 719 ntTSL 2 BASIC17.03■□□□□ 0.32
MBD1Q9UIS9 RNA5SP421-201ENST00000516864 134 ntBASIC17.03■□□□□ 0.32
MBD1Q9UIS9 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.03■□□□□ 0.32
MBD1Q9UIS9 AL135744.1-201ENST00000565098 629 ntBASIC17.03■□□□□ 0.32
MBD1Q9UIS9 AC051619.7-201ENST00000568314 623 ntBASIC17.03■□□□□ 0.32
MBD1Q9UIS9 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.03■□□□□ 0.32
MBD1Q9UIS9 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.03■□□□□ 0.32
MBD1Q9UIS9 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.03■□□□□ 0.32
MBD1Q9UIS9 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.03■□□□□ 0.32
MBD1Q9UIS9 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.03■□□□□ 0.32
MBD1Q9UIS9 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
MBD1Q9UIS9 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
MBD1Q9UIS9 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
MBD1Q9UIS9 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
MBD1Q9UIS9 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.03■□□□□ 0.32
MBD1Q9UIS9 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MBD1Q9UIS9 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
MBD1Q9UIS9 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MBD1Q9UIS9 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
MBD1Q9UIS9 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC17.02■□□□□ 0.32
MBD1Q9UIS9 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MBD1Q9UIS9 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
MBD1Q9UIS9 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
MBD1Q9UIS9 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
MBD1Q9UIS9 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MBD1Q9UIS9 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MBD1Q9UIS9 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.02■□□□□ 0.32
MBD1Q9UIS9 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
MBD1Q9UIS9 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MBD1Q9UIS9 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
MBD1Q9UIS9 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
MBD1Q9UIS9 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
MBD1Q9UIS9 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
MBD1Q9UIS9 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
MBD1Q9UIS9 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
MBD1Q9UIS9 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC17.02■□□□□ 0.32
MBD1Q9UIS9 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MBD1Q9UIS9 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MBD1Q9UIS9 KRT18P32-201ENST00000424695 1287 ntBASIC17.02■□□□□ 0.32
MBD1Q9UIS9 AC055876.3-201ENST00000431496 288 ntBASIC17.02■□□□□ 0.32
MBD1Q9UIS9 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.02■□□□□ 0.32
MBD1Q9UIS9 CNN2P2-201ENST00000443536 909 ntBASIC17.02■□□□□ 0.32
MBD1Q9UIS9 CNN2P3-201ENST00000450201 906 ntBASIC17.02■□□□□ 0.32
MBD1Q9UIS9 RN7SL589P-201ENST00000481268 310 ntBASIC17.02■□□□□ 0.32
MBD1Q9UIS9 AL512356.2-201ENST00000546955 174 ntBASIC17.02■□□□□ 0.32
MBD1Q9UIS9 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.02■□□□□ 0.32
MBD1Q9UIS9 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.02■□□□□ 0.32
MBD1Q9UIS9 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms