Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
CNTN3Q9P232 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
CNTN3Q9P232 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
CNTN3Q9P232 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CNTN3Q9P232 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
CNTN3Q9P232 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CNTN3Q9P232 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC18.21■□□□□ 0.51
CNTN3Q9P232 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC18.21■□□□□ 0.51
CNTN3Q9P232 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
CNTN3Q9P232 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.21■□□□□ 0.51
CNTN3Q9P232 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CNTN3Q9P232 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
CNTN3Q9P232 IGHV3OR16-6-201ENST00000568775 360 ntBASIC18.21■□□□□ 0.51
CNTN3Q9P232 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.21■□□□□ 0.51
CNTN3Q9P232 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.21■□□□□ 0.51
CNTN3Q9P232 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CNTN3Q9P232 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CNTN3Q9P232 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC18.21■□□□□ 0.51
CNTN3Q9P232 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.21■□□□□ 0.51
CNTN3Q9P232 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
CNTN3Q9P232 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CNTN3Q9P232 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CNTN3Q9P232 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.21■□□□□ 0.51
CNTN3Q9P232 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CNTN3Q9P232 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CNTN3Q9P232 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.21■□□□□ 0.51
CNTN3Q9P232 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
CNTN3Q9P232 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CNTN3Q9P232 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
CNTN3Q9P232 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CNTN3Q9P232 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CNTN3Q9P232 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
CNTN3Q9P232 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.2■□□□□ 0.5
CNTN3Q9P232 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CNTN3Q9P232 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CNTN3Q9P232 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.2■□□□□ 0.5
CNTN3Q9P232 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CNTN3Q9P232 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC18.2■□□□□ 0.5
CNTN3Q9P232 AC109635.5-201ENST00000533593 962 ntBASIC18.2■□□□□ 0.5
CNTN3Q9P232 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18.2■□□□□ 0.5
CNTN3Q9P232 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CNTN3Q9P232 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.2■□□□□ 0.5
CNTN3Q9P232 CD7-202ENST00000578509 925 ntTSL 3 BASIC18.2■□□□□ 0.5
CNTN3Q9P232 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.2■□□□□ 0.5
CNTN3Q9P232 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.2■□□□□ 0.5
CNTN3Q9P232 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CNTN3Q9P232 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
CNTN3Q9P232 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18.2■□□□□ 0.5
CNTN3Q9P232 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
CNTN3Q9P232 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CNTN3Q9P232 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CNTN3Q9P232 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CNTN3Q9P232 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CNTN3Q9P232 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CNTN3Q9P232 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CNTN3Q9P232 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CNTN3Q9P232 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CNTN3Q9P232 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CNTN3Q9P232 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CNTN3Q9P232 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CNTN3Q9P232 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CNTN3Q9P232 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CNTN3Q9P232 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC18.2■□□□□ 0.5
CNTN3Q9P232 AL121761.2-201ENST00000598007 1648 ntBASIC18.2■□□□□ 0.5
CNTN3Q9P232 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CNTN3Q9P232 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
CNTN3Q9P232 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CNTN3Q9P232 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CNTN3Q9P232 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CNTN3Q9P232 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
CNTN3Q9P232 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CNTN3Q9P232 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.19■□□□□ 0.5
CNTN3Q9P232 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
CNTN3Q9P232 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CNTN3Q9P232 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CNTN3Q9P232 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CNTN3Q9P232 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CNTN3Q9P232 STOM-202ENST00000347359 870 ntTSL 2 BASIC18.19■□□□□ 0.5
CNTN3Q9P232 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CNTN3Q9P232 RNU1-129P-201ENST00000384064 167 ntBASIC18.19■□□□□ 0.5
CNTN3Q9P232 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CNTN3Q9P232 AL355306.1-201ENST00000415580 579 ntBASIC18.19■□□□□ 0.5
CNTN3Q9P232 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CNTN3Q9P232 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.19■□□□□ 0.5
CNTN3Q9P232 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC18.19■□□□□ 0.5
CNTN3Q9P232 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC18.19■□□□□ 0.5
CNTN3Q9P232 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC18.19■□□□□ 0.5
CNTN3Q9P232 MIR3909-201ENST00000579518 119 ntBASIC18.19■□□□□ 0.5
CNTN3Q9P232 U1.21-201ENST00000580816 167 ntBASIC18.19■□□□□ 0.5
CNTN3Q9P232 AC092068.3-201ENST00000587894 2016 ntBASIC18.19■□□□□ 0.5
CNTN3Q9P232 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.19■□□□□ 0.5
CNTN3Q9P232 AL009183.1-201ENST00000603760 355 ntBASIC18.19■□□□□ 0.5
CNTN3Q9P232 AL596442.2-201ENST00000610240 980 ntBASIC18.19■□□□□ 0.5
CNTN3Q9P232 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.19■□□□□ 0.5
CNTN3Q9P232 AP001350.2-201ENST00000625104 1094 ntBASIC18.19■□□□□ 0.5
CNTN3Q9P232 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
CNTN3Q9P232 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CNTN3Q9P232 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CNTN3Q9P232 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CNTN3Q9P232 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms