Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
NXF3Q9H4D5 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC18.27■□□□□ 0.52
NXF3Q9H4D5 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NXF3Q9H4D5 AL031055.1-201ENST00000606362 631 ntBASIC18.27■□□□□ 0.52
NXF3Q9H4D5 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NXF3Q9H4D5 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC18.27■□□□□ 0.52
NXF3Q9H4D5 SPDYE10P-202ENST00000612005 668 ntBASIC18.27■□□□□ 0.52
NXF3Q9H4D5 SPDYE8P-202ENST00000612377 668 ntBASIC18.27■□□□□ 0.52
NXF3Q9H4D5 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.27■□□□□ 0.52
NXF3Q9H4D5 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NXF3Q9H4D5 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NXF3Q9H4D5 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
NXF3Q9H4D5 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
NXF3Q9H4D5 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
NXF3Q9H4D5 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.51
NXF3Q9H4D5 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
NXF3Q9H4D5 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
NXF3Q9H4D5 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
NXF3Q9H4D5 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NXF3Q9H4D5 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NXF3Q9H4D5 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.26■□□□□ 0.51
NXF3Q9H4D5 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
NXF3Q9H4D5 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
NXF3Q9H4D5 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NXF3Q9H4D5 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC18.26■□□□□ 0.51
NXF3Q9H4D5 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
NXF3Q9H4D5 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.26■□□□□ 0.51
NXF3Q9H4D5 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
NXF3Q9H4D5 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NXF3Q9H4D5 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.26■□□□□ 0.51
NXF3Q9H4D5 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NXF3Q9H4D5 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NXF3Q9H4D5 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NXF3Q9H4D5 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
NXF3Q9H4D5 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
NXF3Q9H4D5 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC18.26■□□□□ 0.51
NXF3Q9H4D5 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.26■□□□□ 0.51
NXF3Q9H4D5 CBR1-202ENST00000399191 838 ntTSL 3 BASIC18.26■□□□□ 0.51
NXF3Q9H4D5 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NXF3Q9H4D5 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC18.26■□□□□ 0.51
NXF3Q9H4D5 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC18.26■□□□□ 0.51
NXF3Q9H4D5 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC18.26■□□□□ 0.51
NXF3Q9H4D5 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.26■□□□□ 0.51
NXF3Q9H4D5 AC023141.5-201ENST00000458585 616 ntBASIC18.26■□□□□ 0.51
NXF3Q9H4D5 AC079140.1-201ENST00000508039 487 ntBASIC18.26■□□□□ 0.51
NXF3Q9H4D5 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC18.26■□□□□ 0.51
NXF3Q9H4D5 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.26■□□□□ 0.51
NXF3Q9H4D5 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
NXF3Q9H4D5 FAM86C2P-203ENST00000528684 1004 ntBASIC18.26■□□□□ 0.51
NXF3Q9H4D5 RFPL4AP1-201ENST00000530883 850 ntBASIC18.26■□□□□ 0.51
NXF3Q9H4D5 RNF34-208ENST00000555076 593 ntTSL 3 BASIC18.26■□□□□ 0.51
NXF3Q9H4D5 AC243562.1-201ENST00000560672 389 ntBASIC18.26■□□□□ 0.51
NXF3Q9H4D5 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC18.26■□□□□ 0.51
NXF3Q9H4D5 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC18.26■□□□□ 0.51
NXF3Q9H4D5 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC18.26■□□□□ 0.51
NXF3Q9H4D5 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
NXF3Q9H4D5 AC106820.2-201ENST00000563775 3264 ntBASIC18.26■□□□□ 0.51
NXF3Q9H4D5 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NXF3Q9H4D5 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NXF3Q9H4D5 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC18.26■□□□□ 0.51
NXF3Q9H4D5 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
NXF3Q9H4D5 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NXF3Q9H4D5 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC18.26■□□□□ 0.51
NXF3Q9H4D5 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NXF3Q9H4D5 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NXF3Q9H4D5 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NXF3Q9H4D5 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NXF3Q9H4D5 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NXF3Q9H4D5 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
NXF3Q9H4D5 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
NXF3Q9H4D5 AC108860.2-201ENST00000562760 2183 ntBASIC18.25■□□□□ 0.51
NXF3Q9H4D5 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
NXF3Q9H4D5 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.25■□□□□ 0.51
NXF3Q9H4D5 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NXF3Q9H4D5 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
NXF3Q9H4D5 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NXF3Q9H4D5 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
NXF3Q9H4D5 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NXF3Q9H4D5 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.25■□□□□ 0.51
NXF3Q9H4D5 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NXF3Q9H4D5 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NXF3Q9H4D5 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
NXF3Q9H4D5 AL627223.1-201ENST00000416693 442 ntBASIC18.25■□□□□ 0.51
NXF3Q9H4D5 HMGN1P19-201ENST00000436976 333 ntBASIC18.25■□□□□ 0.51
NXF3Q9H4D5 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC18.25■□□□□ 0.51
NXF3Q9H4D5 RN7SL589P-201ENST00000481268 310 ntBASIC18.25■□□□□ 0.51
NXF3Q9H4D5 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18.25■□□□□ 0.51
NXF3Q9H4D5 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC18.25■□□□□ 0.51
NXF3Q9H4D5 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.25■□□□□ 0.51
NXF3Q9H4D5 MIR4492-201ENST00000581627 80 ntBASIC18.25■□□□□ 0.51
NXF3Q9H4D5 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC18.25■□□□□ 0.51
NXF3Q9H4D5 AL161645.1-201ENST00000622716 1255 ntBASIC18.25■□□□□ 0.51
NXF3Q9H4D5 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NXF3Q9H4D5 AC005332.8-201ENST00000622750 2735 ntBASIC18.25■□□□□ 0.51
NXF3Q9H4D5 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NXF3Q9H4D5 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
NXF3Q9H4D5 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
NXF3Q9H4D5 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NXF3Q9H4D5 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.25■□□□□ 0.51
NXF3Q9H4D5 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms