Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.19■□□□□ 0.02
NELFAQ9H3P2 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NELFAQ9H3P2 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
NELFAQ9H3P2 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NELFAQ9H3P2 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.19■□□□□ 0.02
NELFAQ9H3P2 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NELFAQ9H3P2 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NELFAQ9H3P2 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NELFAQ9H3P2 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
NELFAQ9H3P2 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
NELFAQ9H3P2 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NELFAQ9H3P2 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NELFAQ9H3P2 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
NELFAQ9H3P2 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
NELFAQ9H3P2 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
NELFAQ9H3P2 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NELFAQ9H3P2 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
NELFAQ9H3P2 HLA-A-201ENST00000376802 1334 ntBASIC15.18■□□□□ 0.02
NELFAQ9H3P2 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
NELFAQ9H3P2 AC097637.2-201ENST00000624096 1997 ntBASIC15.18■□□□□ 0.02
NELFAQ9H3P2 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
NELFAQ9H3P2 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.18■□□□□ 0.02
NELFAQ9H3P2 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
NELFAQ9H3P2 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NELFAQ9H3P2 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NELFAQ9H3P2 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.18■□□□□ 0.02
NELFAQ9H3P2 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
NELFAQ9H3P2 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NELFAQ9H3P2 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NELFAQ9H3P2 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.18■□□□□ 0.02
NELFAQ9H3P2 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NELFAQ9H3P2 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.18■□□□□ 0.02
NELFAQ9H3P2 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NELFAQ9H3P2 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
NELFAQ9H3P2 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NELFAQ9H3P2 AL031284.1-201ENST00000419297 478 ntBASIC15.18■□□□□ 0.02
NELFAQ9H3P2 LAGE3P1-201ENST00000425356 484 ntBASIC15.18■□□□□ 0.02
NELFAQ9H3P2 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NELFAQ9H3P2 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
NELFAQ9H3P2 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NELFAQ9H3P2 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.18■□□□□ 0.02
NELFAQ9H3P2 OR7E14P-202ENST00000530490 1290 ntBASIC15.18■□□□□ 0.02
NELFAQ9H3P2 AL662844.1-201ENST00000546340 181 ntBASIC15.18■□□□□ 0.02
NELFAQ9H3P2 AC012640.2-201ENST00000561606 901 ntBASIC15.18■□□□□ 0.02
NELFAQ9H3P2 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.18■□□□□ 0.02
NELFAQ9H3P2 AL589182.2-201ENST00000619332 1049 ntBASIC15.18■□□□□ 0.02
NELFAQ9H3P2 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
NELFAQ9H3P2 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NELFAQ9H3P2 GPR89P-201ENST00000407924 1495 ntBASIC15.18■□□□□ 0.02
NELFAQ9H3P2 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
NELFAQ9H3P2 AC022211.2-201ENST00000585075 2527 ntBASIC15.18■□□□□ 0.02
NELFAQ9H3P2 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NELFAQ9H3P2 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.18■□□□□ 0.02
NELFAQ9H3P2 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NELFAQ9H3P2 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
NELFAQ9H3P2 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NELFAQ9H3P2 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
NELFAQ9H3P2 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NELFAQ9H3P2 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
NELFAQ9H3P2 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
NELFAQ9H3P2 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
NELFAQ9H3P2 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
NELFAQ9H3P2 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.18■□□□□ 0.02
NELFAQ9H3P2 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
NELFAQ9H3P2 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NELFAQ9H3P2 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
NELFAQ9H3P2 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NELFAQ9H3P2 NCF1C-201ENST00000438382 1427 ntBASIC15.17■□□□□ 0.02
NELFAQ9H3P2 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
NELFAQ9H3P2 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NELFAQ9H3P2 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
NELFAQ9H3P2 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NELFAQ9H3P2 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NELFAQ9H3P2 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NELFAQ9H3P2 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NELFAQ9H3P2 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NELFAQ9H3P2 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.17■□□□□ 0.02
NELFAQ9H3P2 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NELFAQ9H3P2 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NELFAQ9H3P2 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NELFAQ9H3P2 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
NELFAQ9H3P2 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NELFAQ9H3P2 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NELFAQ9H3P2 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NELFAQ9H3P2 LINC00982-205ENST00000420957 435 ntBASIC15.17■□□□□ 0.02
NELFAQ9H3P2 KRT18P27-201ENST00000427733 1299 ntBASIC15.17■□□□□ 0.02
NELFAQ9H3P2 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
NELFAQ9H3P2 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.17■□□□□ 0.02
NELFAQ9H3P2 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.17■□□□□ 0.02
NELFAQ9H3P2 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.17■□□□□ 0.02
NELFAQ9H3P2 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
NELFAQ9H3P2 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.17■□□□□ 0.02
NELFAQ9H3P2 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC15.17■□□□□ 0.02
NELFAQ9H3P2 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.17■□□□□ 0.02
NELFAQ9H3P2 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
NELFAQ9H3P2 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NELFAQ9H3P2 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.17■□□□□ 0.02
NELFAQ9H3P2 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NELFAQ9H3P2 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
NELFAQ9H3P2 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms