Protein–RNA interactions for Protein: Q9BZJ0

CRNKL1, Crooked neck-like protein 1, humanhuman

Known RBP Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1Q9BZJ0 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CRNKL1Q9BZJ0 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC20.13■□□□□ 0.81
CRNKL1Q9BZJ0 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC20.13■□□□□ 0.81
CRNKL1Q9BZJ0 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
CRNKL1Q9BZJ0 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CRNKL1Q9BZJ0 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC20.13■□□□□ 0.81
CRNKL1Q9BZJ0 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CRNKL1Q9BZJ0 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
CRNKL1Q9BZJ0 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC20.13■□□□□ 0.81
CRNKL1Q9BZJ0 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC20.13■□□□□ 0.81
CRNKL1Q9BZJ0 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
CRNKL1Q9BZJ0 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
CRNKL1Q9BZJ0 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
CRNKL1Q9BZJ0 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC20.13■□□□□ 0.81
CRNKL1Q9BZJ0 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC20.13■□□□□ 0.81
CRNKL1Q9BZJ0 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CRNKL1Q9BZJ0 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CRNKL1Q9BZJ0 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC20.13■□□□□ 0.81
CRNKL1Q9BZJ0 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC20.13■□□□□ 0.81
CRNKL1Q9BZJ0 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CRNKL1Q9BZJ0 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CRNKL1Q9BZJ0 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC20.13■□□□□ 0.81
CRNKL1Q9BZJ0 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CRNKL1Q9BZJ0 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CRNKL1Q9BZJ0 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
CRNKL1Q9BZJ0 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CRNKL1Q9BZJ0 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CRNKL1Q9BZJ0 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CRNKL1Q9BZJ0 BANP-227ENST00000626016 2144 ntTSL 2 BASIC20.12■□□□□ 0.81
CRNKL1Q9BZJ0 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
CRNKL1Q9BZJ0 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CRNKL1Q9BZJ0 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CRNKL1Q9BZJ0 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CRNKL1Q9BZJ0 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CRNKL1Q9BZJ0 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC20.12■□□□□ 0.81
CRNKL1Q9BZJ0 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC20.12■□□□□ 0.81
CRNKL1Q9BZJ0 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CRNKL1Q9BZJ0 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CRNKL1Q9BZJ0 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CRNKL1Q9BZJ0 AL355306.1-201ENST00000415580 579 ntBASIC20.12■□□□□ 0.81
CRNKL1Q9BZJ0 ADH5P3-201ENST00000433842 1137 ntBASIC20.12■□□□□ 0.81
CRNKL1Q9BZJ0 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC20.12■□□□□ 0.81
CRNKL1Q9BZJ0 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CRNKL1Q9BZJ0 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC20.12■□□□□ 0.81
CRNKL1Q9BZJ0 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CRNKL1Q9BZJ0 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC20.12■□□□□ 0.81
CRNKL1Q9BZJ0 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CRNKL1Q9BZJ0 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC20.12■□□□□ 0.81
CRNKL1Q9BZJ0 AP000344.2-201ENST00000512987 629 ntBASIC20.12■□□□□ 0.81
CRNKL1Q9BZJ0 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
CRNKL1Q9BZJ0 MIR4492-201ENST00000581627 80 ntBASIC20.12■□□□□ 0.81
CRNKL1Q9BZJ0 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC20.12■□□□□ 0.81
CRNKL1Q9BZJ0 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC20.12■□□□□ 0.81
CRNKL1Q9BZJ0 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
CRNKL1Q9BZJ0 AL009183.1-201ENST00000603760 355 ntBASIC20.12■□□□□ 0.81
CRNKL1Q9BZJ0 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC20.12■□□□□ 0.81
CRNKL1Q9BZJ0 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CRNKL1Q9BZJ0 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CRNKL1Q9BZJ0 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CRNKL1Q9BZJ0 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CRNKL1Q9BZJ0 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
CRNKL1Q9BZJ0 AC108860.2-201ENST00000562760 2183 ntBASIC20.12■□□□□ 0.81
CRNKL1Q9BZJ0 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CRNKL1Q9BZJ0 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CRNKL1Q9BZJ0 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CRNKL1Q9BZJ0 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CRNKL1Q9BZJ0 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CRNKL1Q9BZJ0 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CRNKL1Q9BZJ0 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CRNKL1Q9BZJ0 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CRNKL1Q9BZJ0 PCDHB18P-201ENST00000524813 2368 ntBASIC20.12■□□□□ 0.81
CRNKL1Q9BZJ0 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CRNKL1Q9BZJ0 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CRNKL1Q9BZJ0 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC20.11■□□□□ 0.81
CRNKL1Q9BZJ0 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CRNKL1Q9BZJ0 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CRNKL1Q9BZJ0 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CRNKL1Q9BZJ0 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
CRNKL1Q9BZJ0 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CRNKL1Q9BZJ0 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
CRNKL1Q9BZJ0 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CRNKL1Q9BZJ0 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CRNKL1Q9BZJ0 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CRNKL1Q9BZJ0 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CRNKL1Q9BZJ0 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC20.11■□□□□ 0.81
CRNKL1Q9BZJ0 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CRNKL1Q9BZJ0 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC20.11■□□□□ 0.81
CRNKL1Q9BZJ0 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
CRNKL1Q9BZJ0 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CRNKL1Q9BZJ0 STOM-202ENST00000347359 870 ntTSL 2 BASIC20.11■□□□□ 0.81
CRNKL1Q9BZJ0 RNU1-129P-201ENST00000384064 167 ntBASIC20.11■□□□□ 0.81
CRNKL1Q9BZJ0 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC20.11■□□□□ 0.81
CRNKL1Q9BZJ0 AL671277.1-201ENST00000429656 993 ntBASIC20.11■□□□□ 0.81
CRNKL1Q9BZJ0 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
CRNKL1Q9BZJ0 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC20.11■□□□□ 0.81
CRNKL1Q9BZJ0 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC20.11■□□□□ 0.81
CRNKL1Q9BZJ0 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC20.11■□□□□ 0.81
CRNKL1Q9BZJ0 U1.21-201ENST00000580816 167 ntBASIC20.11■□□□□ 0.81
CRNKL1Q9BZJ0 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC20.11■□□□□ 0.81
CRNKL1Q9BZJ0 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms