Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC21.8■■□□□ 1.08
PCDH11XQ9BZA7 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDH11XQ9BZA7 TEX28P1-201ENST00000613479 1221 ntBASIC21.8■■□□□ 1.08
PCDH11XQ9BZA7 TEX28P2-201ENST00000617764 1221 ntBASIC21.8■■□□□ 1.08
PCDH11XQ9BZA7 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDH11XQ9BZA7 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PCDH11XQ9BZA7 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC21.8■■□□□ 1.08
PCDH11XQ9BZA7 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDH11XQ9BZA7 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PCDH11XQ9BZA7 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC21.8■■□□□ 1.08
PCDH11XQ9BZA7 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDH11XQ9BZA7 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
PCDH11XQ9BZA7 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PCDH11XQ9BZA7 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC21.8■■□□□ 1.08
PCDH11XQ9BZA7 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDH11XQ9BZA7 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC21.8■■□□□ 1.08
PCDH11XQ9BZA7 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDH11XQ9BZA7 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDH11XQ9BZA7 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDH11XQ9BZA7 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC21.8■■□□□ 1.08
PCDH11XQ9BZA7 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PCDH11XQ9BZA7 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
PCDH11XQ9BZA7 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC21.8■■□□□ 1.08
PCDH11XQ9BZA7 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC21.8■■□□□ 1.08
PCDH11XQ9BZA7 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
PCDH11XQ9BZA7 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PCDH11XQ9BZA7 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC21.8■■□□□ 1.08
PCDH11XQ9BZA7 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
PCDH11XQ9BZA7 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDH11XQ9BZA7 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC21.79■■□□□ 1.08
PCDH11XQ9BZA7 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC21.79■■□□□ 1.08
PCDH11XQ9BZA7 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
PCDH11XQ9BZA7 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDH11XQ9BZA7 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDH11XQ9BZA7 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
PCDH11XQ9BZA7 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC21.79■■□□□ 1.08
PCDH11XQ9BZA7 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDH11XQ9BZA7 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC21.79■■□□□ 1.08
PCDH11XQ9BZA7 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDH11XQ9BZA7 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDH11XQ9BZA7 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
PCDH11XQ9BZA7 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDH11XQ9BZA7 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC21.79■■□□□ 1.08
PCDH11XQ9BZA7 OR8S1-201ENST00000310194 1080 ntBASIC21.79■■□□□ 1.08
PCDH11XQ9BZA7 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDH11XQ9BZA7 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC21.79■■□□□ 1.08
PCDH11XQ9BZA7 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC21.79■■□□□ 1.08
PCDH11XQ9BZA7 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC21.79■■□□□ 1.08
PCDH11XQ9BZA7 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC21.79■■□□□ 1.08
PCDH11XQ9BZA7 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC21.79■■□□□ 1.08
PCDH11XQ9BZA7 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC21.79■■□□□ 1.08
PCDH11XQ9BZA7 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDH11XQ9BZA7 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC21.79■■□□□ 1.08
PCDH11XQ9BZA7 AL844908.2-201ENST00000609461 460 ntBASIC21.79■■□□□ 1.08
PCDH11XQ9BZA7 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC21.79■■□□□ 1.08
PCDH11XQ9BZA7 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDH11XQ9BZA7 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC21.78■■□□□ 1.08
PCDH11XQ9BZA7 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDH11XQ9BZA7 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC21.78■■□□□ 1.08
PCDH11XQ9BZA7 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC21.78■■□□□ 1.08
PCDH11XQ9BZA7 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDH11XQ9BZA7 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
PCDH11XQ9BZA7 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDH11XQ9BZA7 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDH11XQ9BZA7 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDH11XQ9BZA7 AC073439.1-201ENST00000624121 1774 ntBASIC21.78■■□□□ 1.08
PCDH11XQ9BZA7 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCDH11XQ9BZA7 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDH11XQ9BZA7 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC21.78■■□□□ 1.08
PCDH11XQ9BZA7 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDH11XQ9BZA7 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.78■■□□□ 1.08
PCDH11XQ9BZA7 AC008764.6-201ENST00000595909 2069 ntBASIC21.78■■□□□ 1.08
PCDH11XQ9BZA7 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC21.78■■□□□ 1.08
PCDH11XQ9BZA7 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
PCDH11XQ9BZA7 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC21.78■■□□□ 1.08
PCDH11XQ9BZA7 WDR53-204ENST00000433160 887 ntTSL 5 BASIC21.78■■□□□ 1.08
PCDH11XQ9BZA7 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCDH11XQ9BZA7 NAA50-208ENST00000497255 789 ntTSL 5 BASIC21.78■■□□□ 1.08
PCDH11XQ9BZA7 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDH11XQ9BZA7 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC21.78■■□□□ 1.08
PCDH11XQ9BZA7 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC21.78■■□□□ 1.08
PCDH11XQ9BZA7 AC008738.7-201ENST00000609744 511 ntBASIC21.78■■□□□ 1.08
PCDH11XQ9BZA7 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC21.78■■□□□ 1.08
PCDH11XQ9BZA7 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDH11XQ9BZA7 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PCDH11XQ9BZA7 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
PCDH11XQ9BZA7 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC21.77■■□□□ 1.08
PCDH11XQ9BZA7 CETN4P-206ENST00000642099 2168 ntBASIC21.77■■□□□ 1.08
PCDH11XQ9BZA7 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDH11XQ9BZA7 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDH11XQ9BZA7 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
PCDH11XQ9BZA7 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
PCDH11XQ9BZA7 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
PCDH11XQ9BZA7 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDH11XQ9BZA7 AC087499.5-201ENST00000452760 1342 ntBASIC21.77■■□□□ 1.08
PCDH11XQ9BZA7 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC21.77■■□□□ 1.08
PCDH11XQ9BZA7 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
PCDH11XQ9BZA7 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC21.77■■□□□ 1.08
PCDH11XQ9BZA7 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC21.77■■□□□ 1.08
PCDH11XQ9BZA7 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms