Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
SEC22CQ9BRL7 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SEC22CQ9BRL7 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
SEC22CQ9BRL7 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SEC22CQ9BRL7 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SEC22CQ9BRL7 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
SEC22CQ9BRL7 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
SEC22CQ9BRL7 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SEC22CQ9BRL7 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.41□□□□□ -0.1
SEC22CQ9BRL7 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SEC22CQ9BRL7 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SEC22CQ9BRL7 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SEC22CQ9BRL7 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.41□□□□□ -0.1
SEC22CQ9BRL7 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SEC22CQ9BRL7 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SEC22CQ9BRL7 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC14.41□□□□□ -0.1
SEC22CQ9BRL7 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SEC22CQ9BRL7 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC14.41□□□□□ -0.1
SEC22CQ9BRL7 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SEC22CQ9BRL7 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.41□□□□□ -0.1
SEC22CQ9BRL7 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC14.41□□□□□ -0.1
SEC22CQ9BRL7 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SEC22CQ9BRL7 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SEC22CQ9BRL7 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SEC22CQ9BRL7 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SEC22CQ9BRL7 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SEC22CQ9BRL7 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SEC22CQ9BRL7 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SEC22CQ9BRL7 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
SEC22CQ9BRL7 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC14.41□□□□□ -0.1
SEC22CQ9BRL7 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC14.41□□□□□ -0.1
SEC22CQ9BRL7 AC073195.1-201ENST00000607241 877 ntBASIC14.41□□□□□ -0.1
SEC22CQ9BRL7 IKBKGP1-201ENST00000612193 1073 ntBASIC14.41□□□□□ -0.1
SEC22CQ9BRL7 AC133041.1-202ENST00000642053 222 ntBASIC14.41□□□□□ -0.1
SEC22CQ9BRL7 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC14.41□□□□□ -0.1
SEC22CQ9BRL7 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
SEC22CQ9BRL7 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SEC22CQ9BRL7 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SEC22CQ9BRL7 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SEC22CQ9BRL7 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SEC22CQ9BRL7 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SEC22CQ9BRL7 ME2P1-201ENST00000426028 1970 ntBASIC14.41□□□□□ -0.1
SEC22CQ9BRL7 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SEC22CQ9BRL7 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SEC22CQ9BRL7 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SEC22CQ9BRL7 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SEC22CQ9BRL7 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SEC22CQ9BRL7 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SEC22CQ9BRL7 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SEC22CQ9BRL7 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SEC22CQ9BRL7 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.41□□□□□ -0.1
SEC22CQ9BRL7 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
SEC22CQ9BRL7 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.41□□□□□ -0.1
SEC22CQ9BRL7 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SEC22CQ9BRL7 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SEC22CQ9BRL7 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.41□□□□□ -0.1
SEC22CQ9BRL7 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC14.41□□□□□ -0.1
SEC22CQ9BRL7 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SEC22CQ9BRL7 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SEC22CQ9BRL7 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SEC22CQ9BRL7 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SEC22CQ9BRL7 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SEC22CQ9BRL7 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.4□□□□□ -0.1
SEC22CQ9BRL7 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SEC22CQ9BRL7 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SEC22CQ9BRL7 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SEC22CQ9BRL7 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SEC22CQ9BRL7 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SEC22CQ9BRL7 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SEC22CQ9BRL7 EGFEM1P-202ENST00000431685 1563 ntBASIC14.4□□□□□ -0.1
SEC22CQ9BRL7 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SEC22CQ9BRL7 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SEC22CQ9BRL7 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SEC22CQ9BRL7 AC069152.1-201ENST00000438030 544 ntBASIC14.4□□□□□ -0.1
SEC22CQ9BRL7 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.4□□□□□ -0.1
SEC22CQ9BRL7 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SEC22CQ9BRL7 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SEC22CQ9BRL7 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC14.4□□□□□ -0.1
SEC22CQ9BRL7 AL603832.2-201ENST00000566195 2125 ntBASIC14.4□□□□□ -0.1
SEC22CQ9BRL7 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC14.4□□□□□ -0.1
SEC22CQ9BRL7 CYGB-204ENST00000589342 815 ntTSL 3 BASIC14.4□□□□□ -0.1
SEC22CQ9BRL7 TMED1-207ENST00000591695 809 ntTSL 5 BASIC14.4□□□□□ -0.1
SEC22CQ9BRL7 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.4□□□□□ -0.1
SEC22CQ9BRL7 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
SEC22CQ9BRL7 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SEC22CQ9BRL7 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SEC22CQ9BRL7 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
SEC22CQ9BRL7 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SEC22CQ9BRL7 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.4□□□□□ -0.1
SEC22CQ9BRL7 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SEC22CQ9BRL7 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SEC22CQ9BRL7 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SEC22CQ9BRL7 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SEC22CQ9BRL7 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SEC22CQ9BRL7 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SEC22CQ9BRL7 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SEC22CQ9BRL7 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SEC22CQ9BRL7 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SEC22CQ9BRL7 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SEC22CQ9BRL7 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms