Protein–RNA interactions for Protein: Q99698

LYST, Lysosomal-trafficking regulator, humanhuman

Predictions only

Length 3,801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSTQ99698 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LYSTQ99698 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC11.61□□□□□ -0.55
LYSTQ99698 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
LYSTQ99698 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
LYSTQ99698 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
LYSTQ99698 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LYSTQ99698 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LYSTQ99698 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
LYSTQ99698 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC11.61□□□□□ -0.55
LYSTQ99698 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC11.61□□□□□ -0.55
LYSTQ99698 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LYSTQ99698 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC11.61□□□□□ -0.55
LYSTQ99698 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC11.61□□□□□ -0.55
LYSTQ99698 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC11.61□□□□□ -0.55
LYSTQ99698 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC11.61□□□□□ -0.55
LYSTQ99698 RETN-203ENST00000629642 400 ntTSL 5 BASIC11.61□□□□□ -0.55
LYSTQ99698 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
LYSTQ99698 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC11.61□□□□□ -0.55
LYSTQ99698 SLC22A20-204ENST00000530038 1673 ntBASIC11.61□□□□□ -0.55
LYSTQ99698 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
LYSTQ99698 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC11.61□□□□□ -0.55
LYSTQ99698 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC11.61□□□□□ -0.55
LYSTQ99698 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
LYSTQ99698 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LYSTQ99698 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LYSTQ99698 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC11.61□□□□□ -0.55
LYSTQ99698 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LYSTQ99698 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
LYSTQ99698 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC11.61□□□□□ -0.55
LYSTQ99698 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LYSTQ99698 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LYSTQ99698 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LYSTQ99698 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC11.61□□□□□ -0.55
LYSTQ99698 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
LYSTQ99698 AC008267.7-201ENST00000624570 1194 ntBASIC11.61□□□□□ -0.55
LYSTQ99698 AL133373.2-201ENST00000623187 2828 ntBASIC11.61□□□□□ -0.55
LYSTQ99698 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
LYSTQ99698 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LYSTQ99698 NARF-206ENST00000457415 1668 ntTSL 5 BASIC11.61□□□□□ -0.55
LYSTQ99698 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC11.61□□□□□ -0.55
LYSTQ99698 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LYSTQ99698 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LYSTQ99698 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
LYSTQ99698 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LYSTQ99698 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LYSTQ99698 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
LYSTQ99698 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LYSTQ99698 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC11.61□□□□□ -0.55
LYSTQ99698 BANF1P1-201ENST00000553684 263 ntBASIC11.61□□□□□ -0.55
LYSTQ99698 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LYSTQ99698 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
LYSTQ99698 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
LYSTQ99698 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LYSTQ99698 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LYSTQ99698 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LYSTQ99698 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
LYSTQ99698 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
LYSTQ99698 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
LYSTQ99698 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
LYSTQ99698 MIR1908-201ENST00000410394 80 ntBASIC11.6□□□□□ -0.55
LYSTQ99698 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
LYSTQ99698 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
LYSTQ99698 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
LYSTQ99698 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC11.6□□□□□ -0.55
LYSTQ99698 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC11.6□□□□□ -0.55
LYSTQ99698 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC11.6□□□□□ -0.55
LYSTQ99698 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC11.6□□□□□ -0.55
LYSTQ99698 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC11.6□□□□□ -0.55
LYSTQ99698 AL009183.1-201ENST00000603760 355 ntBASIC11.6□□□□□ -0.55
LYSTQ99698 AC244093.1-201ENST00000610837 814 ntBASIC11.6□□□□□ -0.55
LYSTQ99698 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LYSTQ99698 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC11.6□□□□□ -0.55
LYSTQ99698 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
LYSTQ99698 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC11.6□□□□□ -0.55
LYSTQ99698 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
LYSTQ99698 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LYSTQ99698 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC11.6□□□□□ -0.55
LYSTQ99698 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC11.6□□□□□ -0.55
LYSTQ99698 AC018665.1-201ENST00000622927 1362 ntBASIC11.6□□□□□ -0.55
LYSTQ99698 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
LYSTQ99698 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
LYSTQ99698 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
LYSTQ99698 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC11.6□□□□□ -0.55
LYSTQ99698 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
LYSTQ99698 AC105233.2-201ENST00000523697 349 ntBASIC11.6□□□□□ -0.55
LYSTQ99698 AF228730.5-201ENST00000530288 346 ntBASIC11.6□□□□□ -0.55
LYSTQ99698 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
LYSTQ99698 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC11.6□□□□□ -0.55
LYSTQ99698 PRR29-204ENST00000577953 565 ntTSL 4 BASIC11.6□□□□□ -0.55
LYSTQ99698 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LYSTQ99698 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC11.6□□□□□ -0.55
LYSTQ99698 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
LYSTQ99698 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LYSTQ99698 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
LYSTQ99698 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LYSTQ99698 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
LYSTQ99698 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
LYSTQ99698 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LYSTQ99698 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC11.6□□□□□ -0.55
LYSTQ99698 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms