Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC15.13■□□□□ 0.01
SPENQ96T58 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.13■□□□□ 0.01
SPENQ96T58 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.13■□□□□ 0.01
SPENQ96T58 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SPENQ96T58 AC004233.3-201ENST00000607794 1269 ntBASIC15.13■□□□□ 0.01
SPENQ96T58 AC017083.2-201ENST00000608069 979 ntBASIC15.13■□□□□ 0.01
SPENQ96T58 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.13■□□□□ 0.01
SPENQ96T58 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.13■□□□□ 0.01
SPENQ96T58 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SPENQ96T58 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
SPENQ96T58 AC012313.1-201ENST00000593393 3059 ntBASIC15.12■□□□□ 0.01
SPENQ96T58 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
SPENQ96T58 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.12■□□□□ 0.01
SPENQ96T58 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SPENQ96T58 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SPENQ96T58 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SPENQ96T58 KRT17P7-201ENST00000451704 1104 ntBASIC15.12■□□□□ 0.01
SPENQ96T58 RARRES2P9-201ENST00000565168 469 ntBASIC15.12■□□□□ 0.01
SPENQ96T58 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.12■□□□□ 0.01
SPENQ96T58 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC15.12■□□□□ 0.01
SPENQ96T58 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SPENQ96T58 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SPENQ96T58 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SPENQ96T58 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SPENQ96T58 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SPENQ96T58 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SPENQ96T58 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SPENQ96T58 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.12■□□□□ 0.01
SPENQ96T58 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.12■□□□□ 0.01
SPENQ96T58 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.12■□□□□ 0.01
SPENQ96T58 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.12■□□□□ 0.01
SPENQ96T58 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SPENQ96T58 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
SPENQ96T58 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SPENQ96T58 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC15.12■□□□□ 0.01
SPENQ96T58 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SPENQ96T58 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
SPENQ96T58 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SPENQ96T58 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SPENQ96T58 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
SPENQ96T58 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SPENQ96T58 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
SPENQ96T58 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
SPENQ96T58 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC15.12■□□□□ 0.01
SPENQ96T58 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SPENQ96T58 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
SPENQ96T58 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SPENQ96T58 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SPENQ96T58 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SPENQ96T58 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SPENQ96T58 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
SPENQ96T58 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SPENQ96T58 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SPENQ96T58 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.11■□□□□ 0.01
SPENQ96T58 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SPENQ96T58 AC008735.3-201ENST00000596646 500 ntBASIC15.11■□□□□ 0.01
SPENQ96T58 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SPENQ96T58 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.11■□□□□ 0.01
SPENQ96T58 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC15.11■□□□□ 0.01
SPENQ96T58 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SPENQ96T58 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.11■□□□□ 0.01
SPENQ96T58 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC15.11■□□□□ 0.01
SPENQ96T58 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SPENQ96T58 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.11■□□□□ 0.01
SPENQ96T58 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
SPENQ96T58 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
SPENQ96T58 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SPENQ96T58 GNAQP1-201ENST00000444815 1067 ntBASIC15.11■□□□□ 0.01
SPENQ96T58 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SPENQ96T58 AC105233.2-201ENST00000523697 349 ntBASIC15.11■□□□□ 0.01
SPENQ96T58 AF228730.5-201ENST00000530288 346 ntBASIC15.11■□□□□ 0.01
SPENQ96T58 ZNF890P-202ENST00000530367 1156 ntBASIC15.11■□□□□ 0.01
SPENQ96T58 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.11■□□□□ 0.01
SPENQ96T58 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.11■□□□□ 0.01
SPENQ96T58 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SPENQ96T58 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SPENQ96T58 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
SPENQ96T58 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SPENQ96T58 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SPENQ96T58 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.11■□□□□ 0.01
SPENQ96T58 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SPENQ96T58 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SPENQ96T58 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
SPENQ96T58 AC131009.4-201ENST00000624048 1740 ntBASIC15.11■□□□□ 0.01
SPENQ96T58 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SPENQ96T58 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SPENQ96T58 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.11■□□□□ 0.01
SPENQ96T58 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.11■□□□□ 0.01
SPENQ96T58 NOP2-211ENST00000540228 668 ntTSL 2 BASIC15.11■□□□□ 0.01
SPENQ96T58 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.11■□□□□ 0.01
SPENQ96T58 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.11■□□□□ 0.01
SPENQ96T58 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SPENQ96T58 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SPENQ96T58 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
SPENQ96T58 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SPENQ96T58 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.1■□□□□ 0.01
SPENQ96T58 IGHV3-62-201ENST00000520057 340 ntBASIC15.1■□□□□ 0.01
SPENQ96T58 AC008738.7-201ENST00000609744 511 ntBASIC15.1■□□□□ 0.01
SPENQ96T58 MIR6787-201ENST00000616675 61 ntBASIC15.1■□□□□ 0.01
SPENQ96T58 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms