Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
SLC46A1Q96NT5 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC46A1Q96NT5 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC46A1Q96NT5 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC46A1Q96NT5 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.22■□□□□ 0.19
SLC46A1Q96NT5 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC46A1Q96NT5 AKAP8P1-201ENST00000434743 1349 ntBASIC16.22■□□□□ 0.19
SLC46A1Q96NT5 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLC46A1Q96NT5 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.22■□□□□ 0.19
SLC46A1Q96NT5 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
SLC46A1Q96NT5 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC46A1Q96NT5 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLC46A1Q96NT5 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC46A1Q96NT5 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SLC46A1Q96NT5 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLC46A1Q96NT5 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.22■□□□□ 0.19
SLC46A1Q96NT5 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLC46A1Q96NT5 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLC46A1Q96NT5 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLC46A1Q96NT5 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC46A1Q96NT5 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC46A1Q96NT5 MIR943-201ENST00000401286 94 ntBASIC16.22■□□□□ 0.19
SLC46A1Q96NT5 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.22■□□□□ 0.19
SLC46A1Q96NT5 AC005034.1-201ENST00000426657 489 ntBASIC16.22■□□□□ 0.19
SLC46A1Q96NT5 FAM58DP-201ENST00000428076 619 ntBASIC16.22■□□□□ 0.19
SLC46A1Q96NT5 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.22■□□□□ 0.19
SLC46A1Q96NT5 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC46A1Q96NT5 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.22■□□□□ 0.19
SLC46A1Q96NT5 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SLC46A1Q96NT5 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.22■□□□□ 0.19
SLC46A1Q96NT5 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.22■□□□□ 0.19
SLC46A1Q96NT5 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.22■□□□□ 0.19
SLC46A1Q96NT5 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC46A1Q96NT5 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.22■□□□□ 0.19
SLC46A1Q96NT5 AL035252.4-201ENST00000624174 288 ntBASIC16.22■□□□□ 0.19
SLC46A1Q96NT5 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLC46A1Q96NT5 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.22■□□□□ 0.19
SLC46A1Q96NT5 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.22■□□□□ 0.19
SLC46A1Q96NT5 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.22■□□□□ 0.19
SLC46A1Q96NT5 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC46A1Q96NT5 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC46A1Q96NT5 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC46A1Q96NT5 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.19
SLC46A1Q96NT5 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC46A1Q96NT5 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SLC46A1Q96NT5 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
SLC46A1Q96NT5 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC46A1Q96NT5 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC46A1Q96NT5 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.21■□□□□ 0.19
SLC46A1Q96NT5 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC46A1Q96NT5 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC46A1Q96NT5 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.21■□□□□ 0.19
SLC46A1Q96NT5 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC46A1Q96NT5 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SLC46A1Q96NT5 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.21■□□□□ 0.19
SLC46A1Q96NT5 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC46A1Q96NT5 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC46A1Q96NT5 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC46A1Q96NT5 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC46A1Q96NT5 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SLC46A1Q96NT5 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.21■□□□□ 0.19
SLC46A1Q96NT5 KLF2P3-201ENST00000451977 1087 ntBASIC16.21■□□□□ 0.19
SLC46A1Q96NT5 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.21■□□□□ 0.19
SLC46A1Q96NT5 TERF1P3-201ENST00000505638 1227 ntBASIC16.21■□□□□ 0.19
SLC46A1Q96NT5 AC087641.1-201ENST00000557561 1021 ntBASIC16.21■□□□□ 0.19
SLC46A1Q96NT5 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SLC46A1Q96NT5 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC46A1Q96NT5 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.21■□□□□ 0.19
SLC46A1Q96NT5 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC46A1Q96NT5 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.21■□□□□ 0.19
SLC46A1Q96NT5 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.21■□□□□ 0.19
SLC46A1Q96NT5 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.21■□□□□ 0.19
SLC46A1Q96NT5 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC46A1Q96NT5 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.21■□□□□ 0.18
SLC46A1Q96NT5 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
SLC46A1Q96NT5 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.21■□□□□ 0.18
SLC46A1Q96NT5 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC46A1Q96NT5 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SLC46A1Q96NT5 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC46A1Q96NT5 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC46A1Q96NT5 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC46A1Q96NT5 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
SLC46A1Q96NT5 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC46A1Q96NT5 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.2■□□□□ 0.18
SLC46A1Q96NT5 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC46A1Q96NT5 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SLC46A1Q96NT5 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.2■□□□□ 0.18
SLC46A1Q96NT5 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SLC46A1Q96NT5 AC236430.1-201ENST00000402231 743 ntBASIC16.2■□□□□ 0.18
SLC46A1Q96NT5 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.2■□□□□ 0.18
SLC46A1Q96NT5 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.2■□□□□ 0.18
SLC46A1Q96NT5 AC002472.2-201ENST00000442739 958 ntBASIC16.2■□□□□ 0.18
SLC46A1Q96NT5 TSPY16P-201ENST00000449843 468 ntBASIC16.2■□□□□ 0.18
SLC46A1Q96NT5 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC46A1Q96NT5 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.2■□□□□ 0.18
SLC46A1Q96NT5 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.2■□□□□ 0.18
SLC46A1Q96NT5 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.2■□□□□ 0.18
SLC46A1Q96NT5 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
SLC46A1Q96NT5 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.2■□□□□ 0.18
SLC46A1Q96NT5 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms