Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
ECHDC3Q96DC8 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
ECHDC3Q96DC8 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ECHDC3Q96DC8 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ECHDC3Q96DC8 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.93■□□□□ 0.3
ECHDC3Q96DC8 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
ECHDC3Q96DC8 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ECHDC3Q96DC8 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ECHDC3Q96DC8 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
ECHDC3Q96DC8 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ECHDC3Q96DC8 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
ECHDC3Q96DC8 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.93■□□□□ 0.3
ECHDC3Q96DC8 UPF3AP3-201ENST00000420996 769 ntBASIC16.93■□□□□ 0.3
ECHDC3Q96DC8 AC140658.5-201ENST00000438532 169 ntBASIC16.93■□□□□ 0.3
ECHDC3Q96DC8 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.93■□□□□ 0.3
ECHDC3Q96DC8 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.93■□□□□ 0.3
ECHDC3Q96DC8 AP002472.1-201ENST00000577490 586 ntBASIC16.93■□□□□ 0.3
ECHDC3Q96DC8 C20orf181-201ENST00000623918 480 ntBASIC16.93■□□□□ 0.3
ECHDC3Q96DC8 LTB4R2-202ENST00000528054 3092 ntBASIC16.93■□□□□ 0.3
ECHDC3Q96DC8 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ECHDC3Q96DC8 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.93■□□□□ 0.3
ECHDC3Q96DC8 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ECHDC3Q96DC8 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ECHDC3Q96DC8 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.93■□□□□ 0.3
ECHDC3Q96DC8 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.93■□□□□ 0.3
ECHDC3Q96DC8 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
ECHDC3Q96DC8 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ECHDC3Q96DC8 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
ECHDC3Q96DC8 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ECHDC3Q96DC8 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
ECHDC3Q96DC8 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ECHDC3Q96DC8 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ECHDC3Q96DC8 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ECHDC3Q96DC8 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
ECHDC3Q96DC8 AC092919.2-201ENST00000623631 1645 ntBASIC16.92■□□□□ 0.3
ECHDC3Q96DC8 AC006277.1-201ENST00000624348 1610 ntBASIC16.92■□□□□ 0.3
ECHDC3Q96DC8 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ECHDC3Q96DC8 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
ECHDC3Q96DC8 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
ECHDC3Q96DC8 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ECHDC3Q96DC8 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
ECHDC3Q96DC8 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ECHDC3Q96DC8 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
ECHDC3Q96DC8 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ECHDC3Q96DC8 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ECHDC3Q96DC8 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.92■□□□□ 0.3
ECHDC3Q96DC8 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ECHDC3Q96DC8 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.92■□□□□ 0.3
ECHDC3Q96DC8 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.92■□□□□ 0.3
ECHDC3Q96DC8 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.92■□□□□ 0.3
ECHDC3Q96DC8 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.92■□□□□ 0.3
ECHDC3Q96DC8 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.92■□□□□ 0.3
ECHDC3Q96DC8 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.92■□□□□ 0.3
ECHDC3Q96DC8 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ECHDC3Q96DC8 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.92■□□□□ 0.3
ECHDC3Q96DC8 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.92■□□□□ 0.3
ECHDC3Q96DC8 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
ECHDC3Q96DC8 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.92■□□□□ 0.3
ECHDC3Q96DC8 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ECHDC3Q96DC8 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
ECHDC3Q96DC8 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
ECHDC3Q96DC8 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ECHDC3Q96DC8 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ECHDC3Q96DC8 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ECHDC3Q96DC8 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ECHDC3Q96DC8 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.91■□□□□ 0.3
ECHDC3Q96DC8 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.91■□□□□ 0.3
ECHDC3Q96DC8 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ECHDC3Q96DC8 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ECHDC3Q96DC8 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ECHDC3Q96DC8 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ECHDC3Q96DC8 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ECHDC3Q96DC8 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
ECHDC3Q96DC8 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.91■□□□□ 0.3
ECHDC3Q96DC8 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ECHDC3Q96DC8 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ECHDC3Q96DC8 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ECHDC3Q96DC8 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
ECHDC3Q96DC8 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.91■□□□□ 0.3
ECHDC3Q96DC8 MKNK2P1-201ENST00000437526 628 ntBASIC16.91■□□□□ 0.3
ECHDC3Q96DC8 AC112482.1-201ENST00000492080 688 ntBASIC16.91■□□□□ 0.3
ECHDC3Q96DC8 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.91■□□□□ 0.3
ECHDC3Q96DC8 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.91■□□□□ 0.3
ECHDC3Q96DC8 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.91■□□□□ 0.3
ECHDC3Q96DC8 AP002490.2-201ENST00000524791 560 ntBASIC16.91■□□□□ 0.3
ECHDC3Q96DC8 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.91■□□□□ 0.3
ECHDC3Q96DC8 AC010327.4-202ENST00000591484 748 ntBASIC16.91■□□□□ 0.3
ECHDC3Q96DC8 CYP2A7P1-201ENST00000595391 815 ntBASIC16.91■□□□□ 0.3
ECHDC3Q96DC8 AP001350.2-201ENST00000625104 1094 ntBASIC16.91■□□□□ 0.3
ECHDC3Q96DC8 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.91■□□□□ 0.3
ECHDC3Q96DC8 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ECHDC3Q96DC8 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.91■□□□□ 0.3
ECHDC3Q96DC8 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
ECHDC3Q96DC8 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ECHDC3Q96DC8 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ECHDC3Q96DC8 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
ECHDC3Q96DC8 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.91■□□□□ 0.3
ECHDC3Q96DC8 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ECHDC3Q96DC8 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ECHDC3Q96DC8 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms