Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 AC134684.3-201ENST00000641758 218 ntBASIC18.24■□□□□ 0.51
BEST2Q8NFU1 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BEST2Q8NFU1 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC18.24■□□□□ 0.51
BEST2Q8NFU1 HARS-203ENST00000431330 1774 ntTSL 2 BASIC18.24■□□□□ 0.51
BEST2Q8NFU1 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BEST2Q8NFU1 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
BEST2Q8NFU1 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BEST2Q8NFU1 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.24■□□□□ 0.51
BEST2Q8NFU1 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BEST2Q8NFU1 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
BEST2Q8NFU1 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BEST2Q8NFU1 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BEST2Q8NFU1 TUBB8P12-201ENST00000308911 1335 ntBASIC18.23■□□□□ 0.51
BEST2Q8NFU1 TUBB7P-202ENST00000428444 1305 ntBASIC18.23■□□□□ 0.51
BEST2Q8NFU1 TUBB8P7-204ENST00000567960 1332 ntBASIC18.23■□□□□ 0.51
BEST2Q8NFU1 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
BEST2Q8NFU1 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
BEST2Q8NFU1 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.23■□□□□ 0.51
BEST2Q8NFU1 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
BEST2Q8NFU1 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.23■□□□□ 0.51
BEST2Q8NFU1 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
BEST2Q8NFU1 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.23■□□□□ 0.51
BEST2Q8NFU1 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
BEST2Q8NFU1 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.23■□□□□ 0.51
BEST2Q8NFU1 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
BEST2Q8NFU1 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
BEST2Q8NFU1 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
BEST2Q8NFU1 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
BEST2Q8NFU1 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
BEST2Q8NFU1 HCG4-201ENST00000418983 998 ntBASIC18.23■□□□□ 0.51
BEST2Q8NFU1 NMU-203ENST00000507338 658 ntTSL 3 BASIC18.23■□□□□ 0.51
BEST2Q8NFU1 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.23■□□□□ 0.51
BEST2Q8NFU1 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC18.23■□□□□ 0.51
BEST2Q8NFU1 AC005829.1-201ENST00000570002 483 ntBASIC18.23■□□□□ 0.51
BEST2Q8NFU1 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
BEST2Q8NFU1 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
BEST2Q8NFU1 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.23■□□□□ 0.51
BEST2Q8NFU1 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.23■□□□□ 0.51
BEST2Q8NFU1 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
BEST2Q8NFU1 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.23■□□□□ 0.51
BEST2Q8NFU1 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
BEST2Q8NFU1 AC012569.1-201ENST00000591191 1524 ntBASIC18.23■□□□□ 0.51
BEST2Q8NFU1 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
BEST2Q8NFU1 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.23■□□□□ 0.51
BEST2Q8NFU1 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
BEST2Q8NFU1 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
BEST2Q8NFU1 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
BEST2Q8NFU1 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
BEST2Q8NFU1 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.22■□□□□ 0.51
BEST2Q8NFU1 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BEST2Q8NFU1 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.22■□□□□ 0.51
BEST2Q8NFU1 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
BEST2Q8NFU1 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.22■□□□□ 0.51
BEST2Q8NFU1 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
BEST2Q8NFU1 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BEST2Q8NFU1 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
BEST2Q8NFU1 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
BEST2Q8NFU1 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
BEST2Q8NFU1 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BEST2Q8NFU1 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BEST2Q8NFU1 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
BEST2Q8NFU1 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.22■□□□□ 0.51
BEST2Q8NFU1 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
BEST2Q8NFU1 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC18.22■□□□□ 0.51
BEST2Q8NFU1 AP006288.1-201ENST00000446065 395 ntBASIC18.22■□□□□ 0.51
BEST2Q8NFU1 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.22■□□□□ 0.51
BEST2Q8NFU1 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
BEST2Q8NFU1 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.22■□□□□ 0.51
BEST2Q8NFU1 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.22■□□□□ 0.51
BEST2Q8NFU1 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.22■□□□□ 0.51
BEST2Q8NFU1 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BEST2Q8NFU1 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
BEST2Q8NFU1 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
BEST2Q8NFU1 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.22■□□□□ 0.51
BEST2Q8NFU1 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
BEST2Q8NFU1 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.22■□□□□ 0.51
BEST2Q8NFU1 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BEST2Q8NFU1 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.22■□□□□ 0.51
BEST2Q8NFU1 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BEST2Q8NFU1 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BEST2Q8NFU1 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
BEST2Q8NFU1 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
BEST2Q8NFU1 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
BEST2Q8NFU1 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
BEST2Q8NFU1 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BEST2Q8NFU1 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
BEST2Q8NFU1 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
BEST2Q8NFU1 OR6D1P-203ENST00000641209 4860 ntBASIC18.21■□□□□ 0.51
BEST2Q8NFU1 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BEST2Q8NFU1 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.21■□□□□ 0.51
BEST2Q8NFU1 NEK7-201ENST00000367383 586 ntTSL 2 BASIC18.21■□□□□ 0.51
BEST2Q8NFU1 HTR5BP-201ENST00000430851 1154 ntBASIC18.21■□□□□ 0.51
BEST2Q8NFU1 MKNK2P1-201ENST00000437526 628 ntBASIC18.21■□□□□ 0.51
BEST2Q8NFU1 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
BEST2Q8NFU1 ALG1L5P-201ENST00000482043 771 ntBASIC18.21■□□□□ 0.51
BEST2Q8NFU1 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.21■□□□□ 0.51
BEST2Q8NFU1 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC18.21■□□□□ 0.51
BEST2Q8NFU1 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC18.21■□□□□ 0.51
BEST2Q8NFU1 MPDU1-223ENST00000582151 728 ntBASIC18.21■□□□□ 0.51
BEST2Q8NFU1 AL078644.1-201ENST00000609881 752 ntBASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms