Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC19.59■□□□□ 0.73
CCDC148Q8NFR7 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC148Q8NFR7 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC19.59■□□□□ 0.73
CCDC148Q8NFR7 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CCDC148Q8NFR7 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC148Q8NFR7 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC148Q8NFR7 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC148Q8NFR7 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC19.58■□□□□ 0.73
CCDC148Q8NFR7 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC148Q8NFR7 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC148Q8NFR7 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC148Q8NFR7 AC002310.6-201ENST00000624451 1377 ntBASIC19.58■□□□□ 0.73
CCDC148Q8NFR7 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC148Q8NFR7 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.73
CCDC148Q8NFR7 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC148Q8NFR7 IL9RP2-201ENST00000423948 1312 ntBASIC19.58■□□□□ 0.73
CCDC148Q8NFR7 AC092068.3-201ENST00000587894 2016 ntBASIC19.58■□□□□ 0.73
CCDC148Q8NFR7 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC19.58■□□□□ 0.73
CCDC148Q8NFR7 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC148Q8NFR7 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC148Q8NFR7 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC148Q8NFR7 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC148Q8NFR7 ATP6V0CP3-201ENST00000417255 467 ntBASIC19.58■□□□□ 0.72
CCDC148Q8NFR7 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC19.58■□□□□ 0.72
CCDC148Q8NFR7 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC19.58■□□□□ 0.72
CCDC148Q8NFR7 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC148Q8NFR7 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.58■□□□□ 0.72
CCDC148Q8NFR7 BX640515.1-201ENST00000617215 977 ntBASIC19.58■□□□□ 0.72
CCDC148Q8NFR7 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC148Q8NFR7 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC19.58■□□□□ 0.72
CCDC148Q8NFR7 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC148Q8NFR7 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC148Q8NFR7 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
CCDC148Q8NFR7 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC148Q8NFR7 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC148Q8NFR7 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC148Q8NFR7 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC148Q8NFR7 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC148Q8NFR7 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC148Q8NFR7 AC080080.1-201ENST00000625121 2420 ntBASIC19.57■□□□□ 0.72
CCDC148Q8NFR7 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC148Q8NFR7 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC19.57■□□□□ 0.72
CCDC148Q8NFR7 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC148Q8NFR7 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CCDC148Q8NFR7 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC148Q8NFR7 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CCDC148Q8NFR7 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC19.57■□□□□ 0.72
CCDC148Q8NFR7 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CCDC148Q8NFR7 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC148Q8NFR7 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CCDC148Q8NFR7 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC148Q8NFR7 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CCDC148Q8NFR7 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC148Q8NFR7 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC148Q8NFR7 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
CCDC148Q8NFR7 AL590627.1-203ENST00000421194 1026 ntBASIC19.57■□□□□ 0.72
CCDC148Q8NFR7 AC009947.1-201ENST00000444350 727 ntBASIC19.57■□□□□ 0.72
CCDC148Q8NFR7 SLC25A6P2-201ENST00000497974 877 ntBASIC19.57■□□□□ 0.72
CCDC148Q8NFR7 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.57■□□□□ 0.72
CCDC148Q8NFR7 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC148Q8NFR7 AC145285.3-201ENST00000564603 959 ntBASIC19.57■□□□□ 0.72
CCDC148Q8NFR7 Z83851.2-201ENST00000609564 659 ntBASIC19.57■□□□□ 0.72
CCDC148Q8NFR7 AC010654.1-201ENST00000615722 808 ntBASIC19.57■□□□□ 0.72
CCDC148Q8NFR7 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC19.57■□□□□ 0.72
CCDC148Q8NFR7 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC148Q8NFR7 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC148Q8NFR7 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC148Q8NFR7 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC148Q8NFR7 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC148Q8NFR7 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC19.57■□□□□ 0.72
CCDC148Q8NFR7 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
CCDC148Q8NFR7 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC148Q8NFR7 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC148Q8NFR7 AC084018.2-201ENST00000613093 2607 ntBASIC19.56■□□□□ 0.72
CCDC148Q8NFR7 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC148Q8NFR7 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CCDC148Q8NFR7 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC148Q8NFR7 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CCDC148Q8NFR7 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC148Q8NFR7 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC148Q8NFR7 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC148Q8NFR7 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC148Q8NFR7 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC148Q8NFR7 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CCDC148Q8NFR7 PRSS29P-201ENST00000440800 595 ntBASIC19.56■□□□□ 0.72
CCDC148Q8NFR7 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC148Q8NFR7 MIR4751-201ENST00000578027 74 ntBASIC19.56■□□□□ 0.72
CCDC148Q8NFR7 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CCDC148Q8NFR7 AC120114.3-201ENST00000611923 658 ntBASIC19.56■□□□□ 0.72
CCDC148Q8NFR7 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC148Q8NFR7 AC004790.2-201ENST00000623588 572 ntBASIC19.56■□□□□ 0.72
CCDC148Q8NFR7 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CCDC148Q8NFR7 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC148Q8NFR7 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC148Q8NFR7 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC148Q8NFR7 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC148Q8NFR7 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC148Q8NFR7 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC148Q8NFR7 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC148Q8NFR7 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms