Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
DNAAF1Q8NEP3 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.03■□□□□ -0
DNAAF1Q8NEP3 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
DNAAF1Q8NEP3 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
DNAAF1Q8NEP3 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
DNAAF1Q8NEP3 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
DNAAF1Q8NEP3 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.02■□□□□ -0
DNAAF1Q8NEP3 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
DNAAF1Q8NEP3 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.02■□□□□ -0
DNAAF1Q8NEP3 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.02■□□□□ -0
DNAAF1Q8NEP3 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
DNAAF1Q8NEP3 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
DNAAF1Q8NEP3 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.02■□□□□ -0
DNAAF1Q8NEP3 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.02■□□□□ -0
DNAAF1Q8NEP3 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
DNAAF1Q8NEP3 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
DNAAF1Q8NEP3 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.02■□□□□ -0
DNAAF1Q8NEP3 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
DNAAF1Q8NEP3 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
DNAAF1Q8NEP3 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
DNAAF1Q8NEP3 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
DNAAF1Q8NEP3 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
DNAAF1Q8NEP3 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
DNAAF1Q8NEP3 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
DNAAF1Q8NEP3 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
DNAAF1Q8NEP3 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
DNAAF1Q8NEP3 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
DNAAF1Q8NEP3 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC15.02■□□□□ -0
DNAAF1Q8NEP3 DAP-202ENST00000432074 1048 ntTSL 2 BASIC15.02■□□□□ -0
DNAAF1Q8NEP3 RN7SL606P-201ENST00000472779 293 ntBASIC15.02■□□□□ -0
DNAAF1Q8NEP3 IGHV3-52-201ENST00000519770 353 ntBASIC15.02■□□□□ -0
DNAAF1Q8NEP3 AC090616.6-201ENST00000582640 721 ntBASIC15.02■□□□□ -0
DNAAF1Q8NEP3 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC15.02■□□□□ -0
DNAAF1Q8NEP3 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC15.02■□□□□ -0
DNAAF1Q8NEP3 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
DNAAF1Q8NEP3 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.02□□□□□ -0.01
DNAAF1Q8NEP3 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
DNAAF1Q8NEP3 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
DNAAF1Q8NEP3 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
DNAAF1Q8NEP3 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.02□□□□□ -0.01
DNAAF1Q8NEP3 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
DNAAF1Q8NEP3 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
DNAAF1Q8NEP3 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
DNAAF1Q8NEP3 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
DNAAF1Q8NEP3 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.02□□□□□ -0.01
DNAAF1Q8NEP3 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
DNAAF1Q8NEP3 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
DNAAF1Q8NEP3 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
DNAAF1Q8NEP3 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
DNAAF1Q8NEP3 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
DNAAF1Q8NEP3 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
DNAAF1Q8NEP3 AC068418.2-201ENST00000577309 3703 ntBASIC15.01□□□□□ -0.01
DNAAF1Q8NEP3 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.01□□□□□ -0.01
DNAAF1Q8NEP3 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
DNAAF1Q8NEP3 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
DNAAF1Q8NEP3 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
DNAAF1Q8NEP3 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
DNAAF1Q8NEP3 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
DNAAF1Q8NEP3 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
DNAAF1Q8NEP3 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC15.01□□□□□ -0.01
DNAAF1Q8NEP3 AC122714.2-201ENST00000502787 707 ntBASIC15.01□□□□□ -0.01
DNAAF1Q8NEP3 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC15.01□□□□□ -0.01
DNAAF1Q8NEP3 AC109462.3-201ENST00000573934 613 ntBASIC15.01□□□□□ -0.01
DNAAF1Q8NEP3 AC019129.2-201ENST00000609837 1235 ntBASIC15.01□□□□□ -0.01
DNAAF1Q8NEP3 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC15.01□□□□□ -0.01
DNAAF1Q8NEP3 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
DNAAF1Q8NEP3 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.01□□□□□ -0.01
DNAAF1Q8NEP3 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
DNAAF1Q8NEP3 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
DNAAF1Q8NEP3 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
DNAAF1Q8NEP3 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
DNAAF1Q8NEP3 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
DNAAF1Q8NEP3 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
DNAAF1Q8NEP3 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
DNAAF1Q8NEP3 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.01□□□□□ -0.01
DNAAF1Q8NEP3 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.01□□□□□ -0.01
DNAAF1Q8NEP3 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.01□□□□□ -0.01
DNAAF1Q8NEP3 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
DNAAF1Q8NEP3 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
DNAAF1Q8NEP3 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
DNAAF1Q8NEP3 AC125634.1-201ENST00000438758 1403 ntBASIC15□□□□□ -0.01
DNAAF1Q8NEP3 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15□□□□□ -0.01
DNAAF1Q8NEP3 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15□□□□□ -0.01
DNAAF1Q8NEP3 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15□□□□□ -0.01
DNAAF1Q8NEP3 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15□□□□□ -0.01
DNAAF1Q8NEP3 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15□□□□□ -0.01
DNAAF1Q8NEP3 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
DNAAF1Q8NEP3 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
DNAAF1Q8NEP3 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
DNAAF1Q8NEP3 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15□□□□□ -0.01
DNAAF1Q8NEP3 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
DNAAF1Q8NEP3 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
DNAAF1Q8NEP3 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
DNAAF1Q8NEP3 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
DNAAF1Q8NEP3 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
DNAAF1Q8NEP3 TSPY22P-201ENST00000427496 604 ntBASIC15□□□□□ -0.01
DNAAF1Q8NEP3 AC007967.3-201ENST00000434308 558 ntBASIC15□□□□□ -0.01
DNAAF1Q8NEP3 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
DNAAF1Q8NEP3 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC15□□□□□ -0.01
DNAAF1Q8NEP3 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms