Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAM1L1Q8N609 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAM1L1Q8N609 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAM1L1Q8N609 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
TRAM1L1Q8N609 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TRAM1L1Q8N609 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.76■□□□□ 0.27
TRAM1L1Q8N609 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.76■□□□□ 0.27
TRAM1L1Q8N609 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.76■□□□□ 0.27
TRAM1L1Q8N609 KRT19P2-202ENST00000557173 1012 ntBASIC16.76■□□□□ 0.27
TRAM1L1Q8N609 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
TRAM1L1Q8N609 MIR4515-201ENST00000584082 81 ntBASIC16.76■□□□□ 0.27
TRAM1L1Q8N609 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRAM1L1Q8N609 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAM1L1Q8N609 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRAM1L1Q8N609 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAM1L1Q8N609 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
TRAM1L1Q8N609 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TRAM1L1Q8N609 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAM1L1Q8N609 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAM1L1Q8N609 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAM1L1Q8N609 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRAM1L1Q8N609 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRAM1L1Q8N609 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.76■□□□□ 0.27
TRAM1L1Q8N609 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRAM1L1Q8N609 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRAM1L1Q8N609 PCDHB17P-201ENST00000539533 2393 ntBASIC16.75■□□□□ 0.27
TRAM1L1Q8N609 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.75■□□□□ 0.27
TRAM1L1Q8N609 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAM1L1Q8N609 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRAM1L1Q8N609 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAM1L1Q8N609 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAM1L1Q8N609 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.75■□□□□ 0.27
TRAM1L1Q8N609 SLC22A20-204ENST00000530038 1673 ntBASIC16.75■□□□□ 0.27
TRAM1L1Q8N609 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAM1L1Q8N609 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
TRAM1L1Q8N609 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAM1L1Q8N609 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.75■□□□□ 0.27
TRAM1L1Q8N609 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
TRAM1L1Q8N609 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRAM1L1Q8N609 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.75■□□□□ 0.27
TRAM1L1Q8N609 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAM1L1Q8N609 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
TRAM1L1Q8N609 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRAM1L1Q8N609 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.75■□□□□ 0.27
TRAM1L1Q8N609 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
TRAM1L1Q8N609 AC013467.2-201ENST00000605472 835 ntBASIC16.75■□□□□ 0.27
TRAM1L1Q8N609 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.75■□□□□ 0.27
TRAM1L1Q8N609 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRAM1L1Q8N609 AP001350.2-201ENST00000625104 1094 ntBASIC16.75■□□□□ 0.27
TRAM1L1Q8N609 AC025580.3-201ENST00000617932 1424 ntBASIC16.75■□□□□ 0.27
TRAM1L1Q8N609 AC131009.4-201ENST00000624048 1740 ntBASIC16.75■□□□□ 0.27
TRAM1L1Q8N609 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAM1L1Q8N609 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TRAM1L1Q8N609 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAM1L1Q8N609 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
TRAM1L1Q8N609 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAM1L1Q8N609 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAM1L1Q8N609 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.75■□□□□ 0.27
TRAM1L1Q8N609 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRAM1L1Q8N609 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAM1L1Q8N609 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
TRAM1L1Q8N609 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
TRAM1L1Q8N609 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRAM1L1Q8N609 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TRAM1L1Q8N609 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRAM1L1Q8N609 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
TRAM1L1Q8N609 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRAM1L1Q8N609 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAM1L1Q8N609 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRAM1L1Q8N609 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.74■□□□□ 0.27
TRAM1L1Q8N609 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
TRAM1L1Q8N609 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRAM1L1Q8N609 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.74■□□□□ 0.27
TRAM1L1Q8N609 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAM1L1Q8N609 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.74■□□□□ 0.27
TRAM1L1Q8N609 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.74■□□□□ 0.27
TRAM1L1Q8N609 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.74■□□□□ 0.27
TRAM1L1Q8N609 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAM1L1Q8N609 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.74■□□□□ 0.27
TRAM1L1Q8N609 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.74■□□□□ 0.27
TRAM1L1Q8N609 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.74■□□□□ 0.27
TRAM1L1Q8N609 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.74■□□□□ 0.27
TRAM1L1Q8N609 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.74■□□□□ 0.27
TRAM1L1Q8N609 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.74■□□□□ 0.27
TRAM1L1Q8N609 AC087641.1-201ENST00000557561 1021 ntBASIC16.74■□□□□ 0.27
TRAM1L1Q8N609 PDPK2P-202ENST00000562415 1191 ntBASIC16.74■□□□□ 0.27
TRAM1L1Q8N609 AL031432.2-201ENST00000566714 459 ntBASIC16.74■□□□□ 0.27
TRAM1L1Q8N609 AC002347.1-201ENST00000569543 541 ntBASIC16.74■□□□□ 0.27
TRAM1L1Q8N609 AL928711.1-201ENST00000570165 459 ntBASIC16.74■□□□□ 0.27
TRAM1L1Q8N609 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.74■□□□□ 0.27
TRAM1L1Q8N609 MIR4492-201ENST00000581627 80 ntBASIC16.74■□□□□ 0.27
TRAM1L1Q8N609 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.74■□□□□ 0.27
TRAM1L1Q8N609 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TRAM1L1Q8N609 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRAM1L1Q8N609 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAM1L1Q8N609 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.74■□□□□ 0.27
TRAM1L1Q8N609 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRAM1L1Q8N609 AC012569.1-201ENST00000591191 1524 ntBASIC16.74■□□□□ 0.27
TRAM1L1Q8N609 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRAM1L1Q8N609 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms