Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PHTF2Q8N3S3 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PHTF2Q8N3S3 KRT18P28-201ENST00000453838 1332 ntBASIC17.58■□□□□ 0.4
PHTF2Q8N3S3 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.58■□□□□ 0.4
PHTF2Q8N3S3 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PHTF2Q8N3S3 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PHTF2Q8N3S3 FAM185BP-201ENST00000443595 716 ntBASIC17.58■□□□□ 0.4
PHTF2Q8N3S3 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.58■□□□□ 0.4
PHTF2Q8N3S3 AC074386.1-202ENST00000463561 864 ntBASIC17.58■□□□□ 0.4
PHTF2Q8N3S3 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.58■□□□□ 0.4
PHTF2Q8N3S3 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.58■□□□□ 0.4
PHTF2Q8N3S3 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
PHTF2Q8N3S3 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.58■□□□□ 0.4
PHTF2Q8N3S3 AC023141.13-201ENST00000604991 943 ntBASIC17.58■□□□□ 0.4
PHTF2Q8N3S3 AL355385.1-201ENST00000606123 409 ntBASIC17.58■□□□□ 0.4
PHTF2Q8N3S3 ACTL9-202ENST00000612068 1252 ntBASIC17.58■□□□□ 0.4
PHTF2Q8N3S3 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PHTF2Q8N3S3 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
PHTF2Q8N3S3 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
PHTF2Q8N3S3 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PHTF2Q8N3S3 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.58■□□□□ 0.4
PHTF2Q8N3S3 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
PHTF2Q8N3S3 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PHTF2Q8N3S3 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PHTF2Q8N3S3 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PHTF2Q8N3S3 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
PHTF2Q8N3S3 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PHTF2Q8N3S3 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PHTF2Q8N3S3 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
PHTF2Q8N3S3 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.57■□□□□ 0.4
PHTF2Q8N3S3 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PHTF2Q8N3S3 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PHTF2Q8N3S3 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.57■□□□□ 0.4
PHTF2Q8N3S3 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.57■□□□□ 0.4
PHTF2Q8N3S3 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PHTF2Q8N3S3 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PHTF2Q8N3S3 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
PHTF2Q8N3S3 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PHTF2Q8N3S3 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
PHTF2Q8N3S3 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.57■□□□□ 0.4
PHTF2Q8N3S3 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.57■□□□□ 0.4
PHTF2Q8N3S3 SLC25A6P2-201ENST00000497974 877 ntBASIC17.57■□□□□ 0.4
PHTF2Q8N3S3 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.57■□□□□ 0.4
PHTF2Q8N3S3 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
PHTF2Q8N3S3 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
PHTF2Q8N3S3 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
PHTF2Q8N3S3 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.57■□□□□ 0.4
PHTF2Q8N3S3 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.57■□□□□ 0.4
PHTF2Q8N3S3 AC012183.1-201ENST00000625197 499 ntBASIC17.57■□□□□ 0.4
PHTF2Q8N3S3 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PHTF2Q8N3S3 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PHTF2Q8N3S3 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PHTF2Q8N3S3 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PHTF2Q8N3S3 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
PHTF2Q8N3S3 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PHTF2Q8N3S3 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PHTF2Q8N3S3 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.56■□□□□ 0.4
PHTF2Q8N3S3 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
PHTF2Q8N3S3 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PHTF2Q8N3S3 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PHTF2Q8N3S3 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.56■□□□□ 0.4
PHTF2Q8N3S3 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
PHTF2Q8N3S3 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PHTF2Q8N3S3 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PHTF2Q8N3S3 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PHTF2Q8N3S3 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PHTF2Q8N3S3 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PHTF2Q8N3S3 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PHTF2Q8N3S3 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PHTF2Q8N3S3 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.56■□□□□ 0.4
PHTF2Q8N3S3 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
PHTF2Q8N3S3 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PHTF2Q8N3S3 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PHTF2Q8N3S3 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PHTF2Q8N3S3 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.56■□□□□ 0.4
PHTF2Q8N3S3 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PHTF2Q8N3S3 CEND1P1-201ENST00000451006 455 ntBASIC17.56■□□□□ 0.4
PHTF2Q8N3S3 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PHTF2Q8N3S3 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.56■□□□□ 0.4
PHTF2Q8N3S3 SNHG9-202ENST00000564014 471 ntBASIC17.56■□□□□ 0.4
PHTF2Q8N3S3 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.56■□□□□ 0.4
PHTF2Q8N3S3 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.56■□□□□ 0.4
PHTF2Q8N3S3 AC007064.4-201ENST00000637740 555 ntBASIC17.56■□□□□ 0.4
PHTF2Q8N3S3 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PHTF2Q8N3S3 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PHTF2Q8N3S3 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PHTF2Q8N3S3 CROCCP2-202ENST00000412962 2773 ntBASIC17.56■□□□□ 0.4
PHTF2Q8N3S3 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PHTF2Q8N3S3 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PHTF2Q8N3S3 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PHTF2Q8N3S3 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PHTF2Q8N3S3 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PHTF2Q8N3S3 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
PHTF2Q8N3S3 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PHTF2Q8N3S3 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PHTF2Q8N3S3 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PHTF2Q8N3S3 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PHTF2Q8N3S3 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PHTF2Q8N3S3 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.55■□□□□ 0.4
PHTF2Q8N3S3 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms