Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCN4BQ8IWT1 FRMD8P1-201ENST00000440433 1524 ntBASIC17.89■□□□□ 0.45
SCN4BQ8IWT1 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.89■□□□□ 0.45
SCN4BQ8IWT1 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCN4BQ8IWT1 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
SCN4BQ8IWT1 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCN4BQ8IWT1 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCN4BQ8IWT1 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCN4BQ8IWT1 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCN4BQ8IWT1 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCN4BQ8IWT1 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.89■□□□□ 0.45
SCN4BQ8IWT1 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.89■□□□□ 0.45
SCN4BQ8IWT1 MKNK2P1-201ENST00000437526 628 ntBASIC17.89■□□□□ 0.45
SCN4BQ8IWT1 DNAJB3-202ENST00000449667 1266 ntBASIC17.89■□□□□ 0.45
SCN4BQ8IWT1 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.89■□□□□ 0.45
SCN4BQ8IWT1 AP001160.2-201ENST00000596071 487 ntBASIC17.89■□□□□ 0.45
SCN4BQ8IWT1 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.89■□□□□ 0.45
SCN4BQ8IWT1 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCN4BQ8IWT1 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCN4BQ8IWT1 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
SCN4BQ8IWT1 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.89■□□□□ 0.45
SCN4BQ8IWT1 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SCN4BQ8IWT1 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCN4BQ8IWT1 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCN4BQ8IWT1 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
SCN4BQ8IWT1 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCN4BQ8IWT1 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.89■□□□□ 0.45
SCN4BQ8IWT1 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SCN4BQ8IWT1 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.89■□□□□ 0.45
SCN4BQ8IWT1 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SCN4BQ8IWT1 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.89■□□□□ 0.45
SCN4BQ8IWT1 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SCN4BQ8IWT1 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
SCN4BQ8IWT1 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SCN4BQ8IWT1 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
SCN4BQ8IWT1 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
SCN4BQ8IWT1 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SCN4BQ8IWT1 ELL2P1-201ENST00000413990 1906 ntBASIC17.88■□□□□ 0.45
SCN4BQ8IWT1 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SCN4BQ8IWT1 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCN4BQ8IWT1 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.88■□□□□ 0.45
SCN4BQ8IWT1 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.88■□□□□ 0.45
SCN4BQ8IWT1 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCN4BQ8IWT1 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SCN4BQ8IWT1 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SCN4BQ8IWT1 YBX1P5-201ENST00000509441 847 ntBASIC17.88■□□□□ 0.45
SCN4BQ8IWT1 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SCN4BQ8IWT1 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCN4BQ8IWT1 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.88■□□□□ 0.45
SCN4BQ8IWT1 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.88■□□□□ 0.45
SCN4BQ8IWT1 AC005412.3-201ENST00000580309 715 ntBASIC17.88■□□□□ 0.45
SCN4BQ8IWT1 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.88■□□□□ 0.45
SCN4BQ8IWT1 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.88■□□□□ 0.45
SCN4BQ8IWT1 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.88■□□□□ 0.45
SCN4BQ8IWT1 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCN4BQ8IWT1 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCN4BQ8IWT1 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SCN4BQ8IWT1 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
SCN4BQ8IWT1 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SCN4BQ8IWT1 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
SCN4BQ8IWT1 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SCN4BQ8IWT1 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCN4BQ8IWT1 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SCN4BQ8IWT1 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.88■□□□□ 0.45
SCN4BQ8IWT1 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
SCN4BQ8IWT1 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCN4BQ8IWT1 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SCN4BQ8IWT1 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
SCN4BQ8IWT1 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SCN4BQ8IWT1 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.87■□□□□ 0.45
SCN4BQ8IWT1 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.87■□□□□ 0.45
SCN4BQ8IWT1 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SCN4BQ8IWT1 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
SCN4BQ8IWT1 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SCN4BQ8IWT1 AC005332.8-201ENST00000622750 2735 ntBASIC17.87■□□□□ 0.45
SCN4BQ8IWT1 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SCN4BQ8IWT1 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SCN4BQ8IWT1 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.87■□□□□ 0.45
SCN4BQ8IWT1 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
SCN4BQ8IWT1 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SCN4BQ8IWT1 LINC02012-201ENST00000608206 1725 ntBASIC17.87■□□□□ 0.45
SCN4BQ8IWT1 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.87■□□□□ 0.45
SCN4BQ8IWT1 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SCN4BQ8IWT1 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SCN4BQ8IWT1 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.87■□□□□ 0.45
SCN4BQ8IWT1 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SCN4BQ8IWT1 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.87■□□□□ 0.45
SCN4BQ8IWT1 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.87■□□□□ 0.45
SCN4BQ8IWT1 AC092183.1-201ENST00000469884 875 ntBASIC17.87■□□□□ 0.45
SCN4BQ8IWT1 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
SCN4BQ8IWT1 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
SCN4BQ8IWT1 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.87■□□□□ 0.45
SCN4BQ8IWT1 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
SCN4BQ8IWT1 AL031432.2-201ENST00000566714 459 ntBASIC17.87■□□□□ 0.45
SCN4BQ8IWT1 AL928711.1-201ENST00000570165 459 ntBASIC17.87■□□□□ 0.45
SCN4BQ8IWT1 MIR4515-201ENST00000584082 81 ntBASIC17.87■□□□□ 0.45
SCN4BQ8IWT1 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.87■□□□□ 0.45
SCN4BQ8IWT1 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.87■□□□□ 0.45
SCN4BQ8IWT1 AL645728.2-201ENST00000641974 660 ntBASIC17.87■□□□□ 0.45
SCN4BQ8IWT1 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms