Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 REM2-202ENST00000536884 1331 ntTSL 2 BASIC20.14■□□□□ 0.81
CTR9Q6PD62 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CTR9Q6PD62 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
CTR9Q6PD62 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CTR9Q6PD62 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC20.14■□□□□ 0.81
CTR9Q6PD62 HTR5BP-201ENST00000430851 1154 ntBASIC20.14■□□□□ 0.81
CTR9Q6PD62 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CTR9Q6PD62 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CTR9Q6PD62 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CTR9Q6PD62 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CTR9Q6PD62 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC20.14■□□□□ 0.81
CTR9Q6PD62 AC108860.2-201ENST00000562760 2183 ntBASIC20.14■□□□□ 0.81
CTR9Q6PD62 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CTR9Q6PD62 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
CTR9Q6PD62 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC20.14■□□□□ 0.81
CTR9Q6PD62 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CTR9Q6PD62 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CTR9Q6PD62 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CTR9Q6PD62 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
CTR9Q6PD62 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC20.13■□□□□ 0.81
CTR9Q6PD62 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CTR9Q6PD62 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC20.13■□□□□ 0.81
CTR9Q6PD62 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CTR9Q6PD62 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CTR9Q6PD62 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CTR9Q6PD62 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
CTR9Q6PD62 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CTR9Q6PD62 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
CTR9Q6PD62 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CTR9Q6PD62 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
CTR9Q6PD62 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CTR9Q6PD62 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
CTR9Q6PD62 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC20.13■□□□□ 0.81
CTR9Q6PD62 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CTR9Q6PD62 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CTR9Q6PD62 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CTR9Q6PD62 AC124947.2-201ENST00000547118 1133 ntBASIC20.13■□□□□ 0.81
CTR9Q6PD62 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC20.13■□□□□ 0.81
CTR9Q6PD62 AP002472.1-201ENST00000577490 586 ntBASIC20.13■□□□□ 0.81
CTR9Q6PD62 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC20.13■□□□□ 0.81
CTR9Q6PD62 MIR4515-201ENST00000584082 81 ntBASIC20.13■□□□□ 0.81
CTR9Q6PD62 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC20.13■□□□□ 0.81
CTR9Q6PD62 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CTR9Q6PD62 AL691403.2-201ENST00000618460 490 ntBASIC20.13■□□□□ 0.81
CTR9Q6PD62 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CTR9Q6PD62 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
CTR9Q6PD62 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CTR9Q6PD62 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CTR9Q6PD62 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
CTR9Q6PD62 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CTR9Q6PD62 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CTR9Q6PD62 SLC22A20-204ENST00000530038 1673 ntBASIC20.13■□□□□ 0.81
CTR9Q6PD62 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CTR9Q6PD62 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
CTR9Q6PD62 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC20.13■□□□□ 0.81
CTR9Q6PD62 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CTR9Q6PD62 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CTR9Q6PD62 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC20.12■□□□□ 0.81
CTR9Q6PD62 TNRC18P3-201ENST00000441896 2691 ntBASIC20.12■□□□□ 0.81
CTR9Q6PD62 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC20.12■□□□□ 0.81
CTR9Q6PD62 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
CTR9Q6PD62 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CTR9Q6PD62 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CTR9Q6PD62 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CTR9Q6PD62 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CTR9Q6PD62 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC20.12■□□□□ 0.81
CTR9Q6PD62 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CTR9Q6PD62 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CTR9Q6PD62 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
CTR9Q6PD62 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC20.12■□□□□ 0.81
CTR9Q6PD62 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CTR9Q6PD62 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CTR9Q6PD62 MKNK2P1-201ENST00000437526 628 ntBASIC20.12■□□□□ 0.81
CTR9Q6PD62 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC20.12■□□□□ 0.81
CTR9Q6PD62 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC20.12■□□□□ 0.81
CTR9Q6PD62 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC20.12■□□□□ 0.81
CTR9Q6PD62 AC005412.3-201ENST00000580309 715 ntBASIC20.12■□□□□ 0.81
CTR9Q6PD62 MIR4469-201ENST00000583919 79 ntBASIC20.12■□□□□ 0.81
CTR9Q6PD62 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC20.12■□□□□ 0.81
CTR9Q6PD62 AC068137.2-201ENST00000605408 478 ntBASIC20.12■□□□□ 0.81
CTR9Q6PD62 AC134684.3-201ENST00000641758 218 ntBASIC20.12■□□□□ 0.81
CTR9Q6PD62 AL645728.2-201ENST00000641974 660 ntBASIC20.12■□□□□ 0.81
CTR9Q6PD62 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CTR9Q6PD62 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CTR9Q6PD62 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
CTR9Q6PD62 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CTR9Q6PD62 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
CTR9Q6PD62 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CTR9Q6PD62 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC20.12■□□□□ 0.81
CTR9Q6PD62 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC20.12■□□□□ 0.81
CTR9Q6PD62 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
CTR9Q6PD62 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CTR9Q6PD62 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CTR9Q6PD62 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CTR9Q6PD62 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC20.11■□□□□ 0.81
CTR9Q6PD62 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC20.11■□□□□ 0.81
CTR9Q6PD62 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
CTR9Q6PD62 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC20.11■□□□□ 0.81
CTR9Q6PD62 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC20.11■□□□□ 0.81
CTR9Q6PD62 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms