Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.87■□□□□ 0.61
SWSAP1Q6NVH7 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
SWSAP1Q6NVH7 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC18.87■□□□□ 0.61
SWSAP1Q6NVH7 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SWSAP1Q6NVH7 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
SWSAP1Q6NVH7 AC124947.2-201ENST00000547118 1133 ntBASIC18.87■□□□□ 0.61
SWSAP1Q6NVH7 AC091167.2-201ENST00000579581 588 ntBASIC18.87■□□□□ 0.61
SWSAP1Q6NVH7 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC18.87■□□□□ 0.61
SWSAP1Q6NVH7 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.87■□□□□ 0.61
SWSAP1Q6NVH7 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.87■□□□□ 0.61
SWSAP1Q6NVH7 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SWSAP1Q6NVH7 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
SWSAP1Q6NVH7 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SWSAP1Q6NVH7 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
SWSAP1Q6NVH7 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SWSAP1Q6NVH7 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SWSAP1Q6NVH7 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.86■□□□□ 0.61
SWSAP1Q6NVH7 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SWSAP1Q6NVH7 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
SWSAP1Q6NVH7 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.86■□□□□ 0.61
SWSAP1Q6NVH7 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SWSAP1Q6NVH7 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SWSAP1Q6NVH7 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SWSAP1Q6NVH7 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SWSAP1Q6NVH7 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SWSAP1Q6NVH7 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SWSAP1Q6NVH7 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SWSAP1Q6NVH7 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SWSAP1Q6NVH7 HCG4-201ENST00000418983 998 ntBASIC18.86■□□□□ 0.61
SWSAP1Q6NVH7 CNN2P11-201ENST00000429351 262 ntBASIC18.86■□□□□ 0.61
SWSAP1Q6NVH7 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC18.86■□□□□ 0.61
SWSAP1Q6NVH7 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.86■□□□□ 0.61
SWSAP1Q6NVH7 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC18.86■□□□□ 0.61
SWSAP1Q6NVH7 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC18.86■□□□□ 0.61
SWSAP1Q6NVH7 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
SWSAP1Q6NVH7 THTPA-204ENST00000554970 569 ntTSL 4 BASIC18.86■□□□□ 0.61
SWSAP1Q6NVH7 THTPA-206ENST00000556015 535 ntTSL 3 BASIC18.86■□□□□ 0.61
SWSAP1Q6NVH7 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
SWSAP1Q6NVH7 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.86■□□□□ 0.61
SWSAP1Q6NVH7 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SWSAP1Q6NVH7 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SWSAP1Q6NVH7 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC18.86■□□□□ 0.61
SWSAP1Q6NVH7 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC18.86■□□□□ 0.61
SWSAP1Q6NVH7 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC18.86■□□□□ 0.61
SWSAP1Q6NVH7 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SWSAP1Q6NVH7 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC18.86■□□□□ 0.61
SWSAP1Q6NVH7 AC131009.4-201ENST00000624048 1740 ntBASIC18.86■□□□□ 0.61
SWSAP1Q6NVH7 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SWSAP1Q6NVH7 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SWSAP1Q6NVH7 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SWSAP1Q6NVH7 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SWSAP1Q6NVH7 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
SWSAP1Q6NVH7 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SWSAP1Q6NVH7 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SWSAP1Q6NVH7 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SWSAP1Q6NVH7 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
SWSAP1Q6NVH7 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SWSAP1Q6NVH7 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
SWSAP1Q6NVH7 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.85■□□□□ 0.61
SWSAP1Q6NVH7 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SWSAP1Q6NVH7 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SWSAP1Q6NVH7 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SWSAP1Q6NVH7 IGHV3OR16-6-201ENST00000568775 360 ntBASIC18.85■□□□□ 0.61
SWSAP1Q6NVH7 AC099522.2-201ENST00000607001 744 ntBASIC18.85■□□□□ 0.61
SWSAP1Q6NVH7 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SWSAP1Q6NVH7 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SWSAP1Q6NVH7 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.85■□□□□ 0.61
SWSAP1Q6NVH7 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.85■□□□□ 0.61
SWSAP1Q6NVH7 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.85■□□□□ 0.61
SWSAP1Q6NVH7 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SWSAP1Q6NVH7 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SWSAP1Q6NVH7 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.85■□□□□ 0.61
SWSAP1Q6NVH7 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC18.85■□□□□ 0.61
SWSAP1Q6NVH7 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SWSAP1Q6NVH7 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SWSAP1Q6NVH7 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SWSAP1Q6NVH7 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.85■□□□□ 0.61
SWSAP1Q6NVH7 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SWSAP1Q6NVH7 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
SWSAP1Q6NVH7 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.84■□□□□ 0.61
SWSAP1Q6NVH7 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SWSAP1Q6NVH7 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SWSAP1Q6NVH7 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.84■□□□□ 0.61
SWSAP1Q6NVH7 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.84■□□□□ 0.61
SWSAP1Q6NVH7 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SWSAP1Q6NVH7 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SWSAP1Q6NVH7 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
SWSAP1Q6NVH7 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SWSAP1Q6NVH7 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SWSAP1Q6NVH7 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SWSAP1Q6NVH7 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC18.84■□□□□ 0.61
SWSAP1Q6NVH7 AL671277.1-201ENST00000429656 993 ntBASIC18.84■□□□□ 0.61
SWSAP1Q6NVH7 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SWSAP1Q6NVH7 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC18.84■□□□□ 0.61
SWSAP1Q6NVH7 AC087641.1-201ENST00000557561 1021 ntBASIC18.84■□□□□ 0.61
SWSAP1Q6NVH7 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC18.84■□□□□ 0.61
SWSAP1Q6NVH7 AC105339.1-204ENST00000636249 355 ntBASIC18.84■□□□□ 0.61
SWSAP1Q6NVH7 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
SWSAP1Q6NVH7 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SWSAP1Q6NVH7 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms