Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LPCAT4Q643R3 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LPCAT4Q643R3 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LPCAT4Q643R3 AC006058.4-201ENST00000624016 1670 ntBASIC16.06■□□□□ 0.16
LPCAT4Q643R3 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LPCAT4Q643R3 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LPCAT4Q643R3 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
LPCAT4Q643R3 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC16.06■□□□□ 0.16
LPCAT4Q643R3 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LPCAT4Q643R3 FAM197Y1-201ENST00000421178 764 ntBASIC16.06■□□□□ 0.16
LPCAT4Q643R3 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LPCAT4Q643R3 AC112698.1-201ENST00000510299 916 ntBASIC16.06■□□□□ 0.16
LPCAT4Q643R3 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC16.06■□□□□ 0.16
LPCAT4Q643R3 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.06■□□□□ 0.16
LPCAT4Q643R3 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.06■□□□□ 0.16
LPCAT4Q643R3 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.06■□□□□ 0.16
LPCAT4Q643R3 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.06■□□□□ 0.16
LPCAT4Q643R3 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.06■□□□□ 0.16
LPCAT4Q643R3 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.06■□□□□ 0.16
LPCAT4Q643R3 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.06■□□□□ 0.16
LPCAT4Q643R3 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
LPCAT4Q643R3 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
LPCAT4Q643R3 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC16.06■□□□□ 0.16
LPCAT4Q643R3 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LPCAT4Q643R3 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LPCAT4Q643R3 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LPCAT4Q643R3 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LPCAT4Q643R3 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
LPCAT4Q643R3 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LPCAT4Q643R3 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
LPCAT4Q643R3 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LPCAT4Q643R3 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.06■□□□□ 0.16
LPCAT4Q643R3 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LPCAT4Q643R3 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LPCAT4Q643R3 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LPCAT4Q643R3 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
LPCAT4Q643R3 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LPCAT4Q643R3 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LPCAT4Q643R3 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.05■□□□□ 0.16
LPCAT4Q643R3 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LPCAT4Q643R3 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LPCAT4Q643R3 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LPCAT4Q643R3 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LPCAT4Q643R3 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
LPCAT4Q643R3 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.05■□□□□ 0.16
LPCAT4Q643R3 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LPCAT4Q643R3 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LPCAT4Q643R3 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC16.05■□□□□ 0.16
LPCAT4Q643R3 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LPCAT4Q643R3 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LPCAT4Q643R3 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.05■□□□□ 0.16
LPCAT4Q643R3 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
LPCAT4Q643R3 TBCB-214ENST00000629269 413 ntTSL 5 BASIC16.05■□□□□ 0.16
LPCAT4Q643R3 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LPCAT4Q643R3 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.05■□□□□ 0.16
LPCAT4Q643R3 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC16.05■□□□□ 0.16
LPCAT4Q643R3 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC16.05■□□□□ 0.16
LPCAT4Q643R3 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LPCAT4Q643R3 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LPCAT4Q643R3 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
LPCAT4Q643R3 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LPCAT4Q643R3 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
LPCAT4Q643R3 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LPCAT4Q643R3 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LPCAT4Q643R3 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LPCAT4Q643R3 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LPCAT4Q643R3 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LPCAT4Q643R3 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.05■□□□□ 0.16
LPCAT4Q643R3 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
LPCAT4Q643R3 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LPCAT4Q643R3 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.04■□□□□ 0.16
LPCAT4Q643R3 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LPCAT4Q643R3 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.04■□□□□ 0.16
LPCAT4Q643R3 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.04■□□□□ 0.16
LPCAT4Q643R3 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
LPCAT4Q643R3 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
LPCAT4Q643R3 SNX18-202ENST00000343017 3140 ntBASIC16.04■□□□□ 0.16
LPCAT4Q643R3 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LPCAT4Q643R3 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LPCAT4Q643R3 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LPCAT4Q643R3 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.04■□□□□ 0.16
LPCAT4Q643R3 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LPCAT4Q643R3 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LPCAT4Q643R3 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.04■□□□□ 0.16
LPCAT4Q643R3 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.04■□□□□ 0.16
LPCAT4Q643R3 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.04■□□□□ 0.16
LPCAT4Q643R3 ID1-201ENST00000376105 1233 ntBASIC16.04■□□□□ 0.16
LPCAT4Q643R3 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC16.04■□□□□ 0.16
LPCAT4Q643R3 AC116562.2-201ENST00000507042 360 ntBASIC16.04■□□□□ 0.16
LPCAT4Q643R3 KRT18P6-201ENST00000555540 1265 ntBASIC16.04■□□□□ 0.16
LPCAT4Q643R3 AC006058.3-201ENST00000606217 1069 ntBASIC16.04■□□□□ 0.16
LPCAT4Q643R3 AC024243.1-201ENST00000609234 778 ntBASIC16.04■□□□□ 0.16
LPCAT4Q643R3 AL023803.3-201ENST00000615559 522 ntBASIC16.04■□□□□ 0.16
LPCAT4Q643R3 AC073648.6-201ENST00000641589 218 ntBASIC16.04■□□□□ 0.16
LPCAT4Q643R3 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LPCAT4Q643R3 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LPCAT4Q643R3 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LPCAT4Q643R3 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LPCAT4Q643R3 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.04■□□□□ 0.16
LPCAT4Q643R3 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms