Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC14.55□□□□□ -0.08
LRRK2Q5S007 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRK2Q5S007 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRK2Q5S007 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LRRK2Q5S007 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.55□□□□□ -0.08
LRRK2Q5S007 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRK2Q5S007 AC104457.1-201ENST00000401024 814 ntBASIC14.55□□□□□ -0.08
LRRK2Q5S007 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC14.55□□□□□ -0.08
LRRK2Q5S007 FAM86HP-204ENST00000513466 959 ntBASIC14.55□□□□□ -0.08
LRRK2Q5S007 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.55□□□□□ -0.08
LRRK2Q5S007 SLC25A47P1-201ENST00000531577 414 ntBASIC14.55□□□□□ -0.08
LRRK2Q5S007 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
LRRK2Q5S007 NOC2LP1-202ENST00000452600 2235 ntBASIC14.55□□□□□ -0.08
LRRK2Q5S007 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
LRRK2Q5S007 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.54□□□□□ -0.08
LRRK2Q5S007 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC14.54□□□□□ -0.08
LRRK2Q5S007 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRRK2Q5S007 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRRK2Q5S007 KLF2P4-201ENST00000451959 1225 ntBASIC14.54□□□□□ -0.08
LRRK2Q5S007 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC14.54□□□□□ -0.08
LRRK2Q5S007 AP000812.2-201ENST00000538934 718 ntBASIC14.54□□□□□ -0.08
LRRK2Q5S007 AC079328.1-201ENST00000560358 952 ntBASIC14.54□□□□□ -0.08
LRRK2Q5S007 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
LRRK2Q5S007 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
LRRK2Q5S007 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC14.54□□□□□ -0.08
LRRK2Q5S007 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRRK2Q5S007 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LRRK2Q5S007 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRRK2Q5S007 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRRK2Q5S007 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRRK2Q5S007 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
LRRK2Q5S007 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
LRRK2Q5S007 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRRK2Q5S007 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRRK2Q5S007 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC14.54□□□□□ -0.08
LRRK2Q5S007 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
LRRK2Q5S007 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRRK2Q5S007 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LRRK2Q5S007 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.54□□□□□ -0.08
LRRK2Q5S007 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC14.54□□□□□ -0.08
LRRK2Q5S007 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.54□□□□□ -0.08
LRRK2Q5S007 FADS2-212ENST00000522639 360 ntTSL 5 BASIC14.54□□□□□ -0.08
LRRK2Q5S007 AC105021.1-202ENST00000570572 669 ntBASIC14.54□□□□□ -0.08
LRRK2Q5S007 FADS2-215ENST00000574708 385 ntTSL 3 BASIC14.54□□□□□ -0.08
LRRK2Q5S007 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.54□□□□□ -0.08
LRRK2Q5S007 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.54□□□□□ -0.08
LRRK2Q5S007 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC14.54□□□□□ -0.08
LRRK2Q5S007 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
LRRK2Q5S007 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
LRRK2Q5S007 AC135776.1-201ENST00000319817 2481 ntBASIC14.54□□□□□ -0.08
LRRK2Q5S007 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LRRK2Q5S007 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
LRRK2Q5S007 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC14.53□□□□□ -0.08
LRRK2Q5S007 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
LRRK2Q5S007 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRRK2Q5S007 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
LRRK2Q5S007 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LRRK2Q5S007 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
LRRK2Q5S007 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
LRRK2Q5S007 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRRK2Q5S007 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LRRK2Q5S007 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.53□□□□□ -0.08
LRRK2Q5S007 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC14.53□□□□□ -0.08
LRRK2Q5S007 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
LRRK2Q5S007 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRRK2Q5S007 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
LRRK2Q5S007 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC14.53□□□□□ -0.08
LRRK2Q5S007 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRRK2Q5S007 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.53□□□□□ -0.08
LRRK2Q5S007 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRRK2Q5S007 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LRRK2Q5S007 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.53□□□□□ -0.08
LRRK2Q5S007 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
LRRK2Q5S007 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
LRRK2Q5S007 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRRK2Q5S007 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRRK2Q5S007 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC14.53□□□□□ -0.08
LRRK2Q5S007 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC14.53□□□□□ -0.08
LRRK2Q5S007 MPRIPP1-201ENST00000452433 1089 ntBASIC14.53□□□□□ -0.08
LRRK2Q5S007 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC14.53□□□□□ -0.08
LRRK2Q5S007 AC023310.3-201ENST00000557027 670 ntBASIC14.53□□□□□ -0.08
LRRK2Q5S007 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC14.53□□□□□ -0.08
LRRK2Q5S007 AC105129.2-201ENST00000559536 390 ntBASIC14.53□□□□□ -0.08
LRRK2Q5S007 AC100756.1-201ENST00000562736 682 ntBASIC14.53□□□□□ -0.08
LRRK2Q5S007 AC138749.3-201ENST00000567691 622 ntBASIC14.53□□□□□ -0.08
LRRK2Q5S007 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC14.53□□□□□ -0.08
LRRK2Q5S007 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.53□□□□□ -0.08
LRRK2Q5S007 AC116165.1-201ENST00000611806 668 ntBASIC14.53□□□□□ -0.08
LRRK2Q5S007 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LRRK2Q5S007 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.53□□□□□ -0.08
LRRK2Q5S007 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
LRRK2Q5S007 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LRRK2Q5S007 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
LRRK2Q5S007 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRRK2Q5S007 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LRRK2Q5S007 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC14.52□□□□□ -0.08
LRRK2Q5S007 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC14.52□□□□□ -0.08
LRRK2Q5S007 KRT8P12-202ENST00000472924 1397 ntBASIC14.52□□□□□ -0.08
LRRK2Q5S007 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC14.52□□□□□ -0.08
LRRK2Q5S007 AC092978.1-202ENST00000637590 1327 ntBASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms