Protein–RNA interactions for Protein: Q59H18

TNNI3K, Serine/threonine-protein kinase TNNI3K, humanhuman

Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI3KQ59H18 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TNNI3KQ59H18 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TNNI3KQ59H18 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TNNI3KQ59H18 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC20.65■□□□□ 0.9
TNNI3KQ59H18 AC140658.5-201ENST00000438532 169 ntBASIC20.65■□□□□ 0.9
TNNI3KQ59H18 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC20.65■□□□□ 0.9
TNNI3KQ59H18 NMU-203ENST00000507338 658 ntTSL 3 BASIC20.65■□□□□ 0.9
TNNI3KQ59H18 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC20.65■□□□□ 0.9
TNNI3KQ59H18 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC20.65■□□□□ 0.9
TNNI3KQ59H18 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC20.65■□□□□ 0.9
TNNI3KQ59H18 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC20.65■□□□□ 0.9
TNNI3KQ59H18 AC091812.2-201ENST00000619081 385 ntBASIC20.65■□□□□ 0.9
TNNI3KQ59H18 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC20.65■□□□□ 0.9
TNNI3KQ59H18 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TNNI3KQ59H18 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
TNNI3KQ59H18 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TNNI3KQ59H18 AC022211.2-201ENST00000585075 2527 ntBASIC20.65■□□□□ 0.9
TNNI3KQ59H18 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TNNI3KQ59H18 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TNNI3KQ59H18 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TNNI3KQ59H18 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TNNI3KQ59H18 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TNNI3KQ59H18 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TNNI3KQ59H18 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TNNI3KQ59H18 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
TNNI3KQ59H18 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TNNI3KQ59H18 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
TNNI3KQ59H18 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
TNNI3KQ59H18 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TNNI3KQ59H18 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TNNI3KQ59H18 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TNNI3KQ59H18 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TNNI3KQ59H18 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC20.64■□□□□ 0.89
TNNI3KQ59H18 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
TNNI3KQ59H18 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC20.64■□□□□ 0.89
TNNI3KQ59H18 FAM58CP-201ENST00000435741 640 ntBASIC20.64■□□□□ 0.89
TNNI3KQ59H18 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC20.64■□□□□ 0.89
TNNI3KQ59H18 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC20.64■□□□□ 0.89
TNNI3KQ59H18 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC20.64■□□□□ 0.89
TNNI3KQ59H18 AC055717.3-201ENST00000622967 595 ntBASIC20.64■□□□□ 0.89
TNNI3KQ59H18 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC20.64■□□□□ 0.89
TNNI3KQ59H18 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
TNNI3KQ59H18 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC20.64■□□□□ 0.89
TNNI3KQ59H18 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TNNI3KQ59H18 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TNNI3KQ59H18 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
TNNI3KQ59H18 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC20.64■□□□□ 0.89
TNNI3KQ59H18 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TNNI3KQ59H18 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC20.63■□□□□ 0.89
TNNI3KQ59H18 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TNNI3KQ59H18 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
TNNI3KQ59H18 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TNNI3KQ59H18 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
TNNI3KQ59H18 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TNNI3KQ59H18 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TNNI3KQ59H18 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
TNNI3KQ59H18 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC20.63■□□□□ 0.89
TNNI3KQ59H18 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
TNNI3KQ59H18 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TNNI3KQ59H18 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
TNNI3KQ59H18 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
TNNI3KQ59H18 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TNNI3KQ59H18 HTR5BP-201ENST00000430851 1154 ntBASIC20.63■□□□□ 0.89
TNNI3KQ59H18 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC20.63■□□□□ 0.89
TNNI3KQ59H18 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC20.63■□□□□ 0.89
TNNI3KQ59H18 MTRF1LP2-201ENST00000506027 1122 ntBASIC20.63■□□□□ 0.89
TNNI3KQ59H18 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC20.63■□□□□ 0.89
TNNI3KQ59H18 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC20.63■□□□□ 0.89
TNNI3KQ59H18 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TNNI3KQ59H18 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC20.63■□□□□ 0.89
TNNI3KQ59H18 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TNNI3KQ59H18 SNX33P1-201ENST00000592116 1762 ntBASIC20.63■□□□□ 0.89
TNNI3KQ59H18 PC-204ENST00000524491 1714 ntTSL 2 BASIC20.63■□□□□ 0.89
TNNI3KQ59H18 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
TNNI3KQ59H18 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TNNI3KQ59H18 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC20.63■□□□□ 0.89
TNNI3KQ59H18 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TNNI3KQ59H18 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
TNNI3KQ59H18 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TNNI3KQ59H18 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TNNI3KQ59H18 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TNNI3KQ59H18 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TNNI3KQ59H18 AL391256.1-201ENST00000443260 1855 ntBASIC20.62■□□□□ 0.89
TNNI3KQ59H18 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TNNI3KQ59H18 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TNNI3KQ59H18 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TNNI3KQ59H18 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
TNNI3KQ59H18 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TNNI3KQ59H18 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TNNI3KQ59H18 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TNNI3KQ59H18 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TNNI3KQ59H18 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
TNNI3KQ59H18 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
TNNI3KQ59H18 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
TNNI3KQ59H18 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
TNNI3KQ59H18 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TNNI3KQ59H18 RNU1-129P-201ENST00000384064 167 ntBASIC20.62■□□□□ 0.89
TNNI3KQ59H18 COA5-202ENST00000409997 557 ntTSL 4 BASIC20.62■□□□□ 0.89
TNNI3KQ59H18 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC20.62■□□□□ 0.89
TNNI3KQ59H18 YBX1P5-201ENST00000509441 847 ntBASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms